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Xpert MTB/RIF Ultra assay 用于儿童结核病和利福平耐药检测。

Xpert MTB/RIF Ultra assay for tuberculosis disease and rifampicin resistance in children.

机构信息

The Global Tuberculosis Program, Texas Children's Hospital, Section of Global and Immigrant Health, Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.

Global TB Programme, World Health Organization, Geneva, Switzerland.

出版信息

Cochrane Database Syst Rev. 2022 Sep 6;9(9):CD013359. doi: 10.1002/14651858.CD013359.pub3.


DOI:10.1002/14651858.CD013359.pub3
PMID:36065889
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9446385/
Abstract

BACKGROUND: Every year, an estimated one million children and young adolescents become ill with tuberculosis, and around 226,000 of those children die. Xpert MTB/RIF Ultra (Xpert Ultra) is a molecular World Health Organization (WHO)-recommended rapid diagnostic test that simultaneously detects Mycobacterium tuberculosis complex and rifampicin resistance. We previously published a Cochrane Review 'Xpert MTB/RIF and Xpert MTB/RIF Ultra assays for tuberculosis disease and rifampicin resistance in children'. The current review updates evidence on the diagnostic accuracy of Xpert Ultra in children presumed to have tuberculosis disease. Parts of this review update informed the 2022 WHO updated guidance on management of tuberculosis in children and adolescents. OBJECTIVES: To assess the diagnostic accuracy of Xpert Ultra for detecting: pulmonary tuberculosis, tuberculous meningitis, lymph node tuberculosis, and rifampicin resistance, in children with presumed tuberculosis. Secondary objectives To investigate potential sources of heterogeneity in accuracy estimates. For detection of tuberculosis, we considered age, comorbidity (HIV, severe pneumonia, and severe malnutrition), and specimen type as potential sources. To summarize the frequency of Xpert Ultra trace results. SEARCH METHODS: We searched the Cochrane Infectious Diseases Group Specialized Register, MEDLINE, Embase, three other databases, and three trial registers without language restrictions to 9 March 2021. SELECTION CRITERIA: Cross-sectional and cohort studies and randomized trials that evaluated Xpert Ultra in HIV-positive and HIV-negative children under 15 years of age. We included ongoing studies that helped us address the review objectives. We included studies evaluating sputum, gastric, stool, or nasopharyngeal specimens (pulmonary tuberculosis), cerebrospinal fluid (tuberculous meningitis), and fine needle aspirate or surgical biopsy tissue (lymph node tuberculosis). For detecting tuberculosis, reference standards were microbiological (culture) or composite reference standard; for stool, we also included Xpert Ultra performed on a routine respiratory specimen. For detecting rifampicin resistance, reference standards were drug susceptibility testing or MTBDRplus. DATA COLLECTION AND ANALYSIS: Two review authors independently extracted data and, using QUADAS-2, assessed methodological quality judging risk of bias separately for each target condition and reference standard. For each target condition, we used the bivariate model to estimate summary sensitivity and specificity with 95% confidence intervals (CIs). We stratified all analyses by type of reference standard. We summarized the frequency of Xpert Ultra trace results; trace represents detection of a very low quantity of Mycobacterium tuberculosis DNA. We assessed certainty of evidence using GRADE. MAIN RESULTS: We identified 14 studies (11 new studies since the previous review). For detection of pulmonary tuberculosis, 335 data sets (25,937 participants) were available for analysis. We did not identify any studies that evaluated Xpert Ultra accuracy for tuberculous meningitis or lymph node tuberculosis. Three studies evaluated Xpert Ultra for detection of rifampicin resistance. Ten studies (71%) took place in countries with a high tuberculosis burden based on WHO classification. Overall, risk of bias was low. Detection of pulmonary tuberculosis Sputum, 5 studies Xpert Ultra summary sensitivity verified by culture was 75.3% (95% CI 64.3 to 83.8; 127 participants; high-certainty evidence), and specificity was 97.1% (95% CI 94.7 to 98.5; 1054 participants; high-certainty evidence). Gastric aspirate, 7 studies Xpert Ultra summary sensitivity verified by culture was 70.4% (95% CI 53.9 to 82.9; 120 participants; moderate-certainty evidence), and specificity was 94.1% (95% CI 84.8 to 97.8; 870 participants; moderate-certainty evidence). Stool, 6 studies Xpert Ultra summary sensitivity verified by culture was 56.1% (95% CI 39.1 to 71.7; 200 participants; moderate-certainty evidence), and specificity was 98.0% (95% CI 93.3 to 99.4; 1232 participants; high certainty-evidence). Nasopharyngeal aspirate, 4 studies Xpert Ultra summary sensitivity verified by culture was 43.7% (95% CI 26.7 to 62.2; 46 participants; very low-certainty evidence), and specificity was 97.5% (95% CI 93.6 to 99.0; 489 participants; high-certainty evidence). Xpert Ultra sensitivity was lower against a composite than a culture reference standard for all specimen types other than nasopharyngeal aspirate, while specificity was similar against both reference standards. Interpretation of results In theory, for a population of 1000 children: • where 100 have pulmonary tuberculosis in sputum (by culture): - 101 would be Xpert Ultra-positive, and of these, 26 (26%) would not have pulmonary tuberculosis (false positive); and - 899 would be Xpert Ultra-negative, and of these, 25 (3%) would have tuberculosis (false negative). • where 100 have pulmonary tuberculosis in gastric aspirate (by culture): - 123 would be Xpert Ultra-positive, and of these, 53 (43%) would not have pulmonary tuberculosis (false positive); and - 877 would be Xpert Ultra-negative, and of these, 30 (3%) would have tuberculosis (false negative). • where 100 have pulmonary tuberculosis in stool (by culture): - 74 would be Xpert Ultra-positive, and of these, 18 (24%) would not have pulmonary tuberculosis (false positive); and - 926 would be Xpert Ultra-negative, and of these, 44 (5%) would have tuberculosis (false negative). • where 100 have pulmonary tuberculosis in nasopharyngeal aspirate (by culture): - 66 would be Xpert Ultra-positive, and of these, 22 (33%) would not have pulmonary tuberculosis (false positive); and - 934 would be Xpert Ultra-negative, and of these, 56 (6%) would have tuberculosis (false negative). Detection of rifampicin resistance Xpert Ultra sensitivity was 100% (3 studies, 3 participants; very low-certainty evidence), and specificity range was 97% to 100% (3 studies, 128 participants; low-certainty evidence). Trace results Xpert Ultra trace results, regarded as positive in children by WHO standards, were common. Xpert Ultra specificity remained high in children, despite the frequency of trace results. AUTHORS' CONCLUSIONS: We found Xpert Ultra sensitivity to vary by specimen type, with sputum having the highest sensitivity, followed by gastric aspirate and stool. Nasopharyngeal aspirate had the lowest sensitivity. Xpert Ultra specificity was high against both microbiological and composite reference standards. However, the evidence base is still limited, and findings may be imprecise and vary by study setting. Although we found Xpert Ultra accurate for detection of rifampicin resistance, results were based on a very small number of studies that included only three children with rifampicin resistance. Therefore, findings should be interpreted with caution. Our findings provide support for the use of Xpert Ultra as an initial rapid molecular diagnostic in children being evaluated for tuberculosis.

摘要

背景:每年约有 100 万名儿童和青少年患结核病,其中约 22.6 万名儿童死亡。Xpert MTB/RIF Ultra(Xpert Ultra)是一种世界卫生组织(WHO)推荐的分子快速诊断检测方法,可同时检测结核分枝杆菌复合群和利福平耐药性。我们之前发表了一篇 Cochrane 综述“Xpert MTB/RIF 和 Xpert MTB/RIF Ultra 检测儿童结核病和利福平耐药性”。本综述更新了 Xpert Ultra 在疑似患有结核病的儿童中检测的诊断准确性。本综述的部分内容为 2022 年 WHO 更新的儿童和青少年结核病管理指南提供了信息。

目的:评估 Xpert Ultra 检测疑似结核病儿童的以下方面的诊断准确性:肺结核、结核性脑膜炎、淋巴结结核和利福平耐药性。次要目标是调查准确性估计值中潜在的异质性来源。对于结核病的检测,我们考虑了年龄、合并症(HIV、严重肺炎和严重营养不良)和标本类型等潜在来源。总结 Xpert Ultra 痕量结果的频率。

检索方法:我们检索了 Cochrane 传染病组专业注册库、MEDLINE、Embase、另外三个数据库和三个试验登记处,检索截止日期为 2021 年 3 月 9 日,无语言限制。

选择标准:评估 Xpert Ultra 在 HIV 阳性和 HIV 阴性 15 岁以下儿童中的横断面和队列研究和随机试验。我们纳入了正在进行的研究,以帮助我们实现综述目标。我们纳入了评估痰、胃、粪便或鼻咽标本(肺结核)、脑脊液(结核性脑膜炎)和细针抽吸或手术活检组织(淋巴结结核)的研究。对于检测结核病,参考标准是微生物学(培养)或复合参考标准;对于粪便,我们还包括了在常规呼吸道标本上进行的 Xpert Ultra 检测。对于检测利福平耐药性,参考标准是药物敏感性试验或 MTBDRplus。

数据收集和分析:两位综述作者独立提取数据,并使用 QUADAS-2 分别评估了每个目标条件和参考标准的方法学质量,判断偏倚风险。对于每个目标条件,我们使用二变量模型估计敏感性和特异性的汇总估计值及其 95%置信区间(CI)。我们根据参考标准的类型对所有分析进行分层。我们总结了 Xpert Ultra 痕量结果的频率;痕量表示检测到非常低量的结核分枝杆菌 DNA。我们使用 GRADE 评估证据的确定性。

主要结果:我们确定了 14 项研究(自上次综述以来有 11 项新研究)。对于检测肺结核,有 335 个数据组(25937 名参与者)可供分析。我们没有发现任何评估 Xpert Ultra 对结核性脑膜炎或淋巴结结核准确性的研究。有三项研究评估了 Xpert Ultra 对利福平耐药性的检测。10 项研究(71%)在基于 WHO 分类的结核病负担高的国家进行。总体而言,偏倚风险较低。检测肺结核:痰,5 项研究经培养验证的 Xpert Ultra 汇总敏感性为 75.3%(95%CI 64.3 至 83.8;127 名参与者;高确定性证据),特异性为 97.1%(95%CI 94.7 至 98.5;1054 名参与者;高确定性证据)。胃抽吸物,7 项研究经培养验证的 Xpert Ultra 汇总敏感性为 70.4%(95%CI 53.9 至 82.9;120 名参与者;中等确定性证据),特异性为 94.1%(95%CI 84.8 至 97.8;870 名参与者;中等确定性证据)。粪便,6 项研究经培养验证的 Xpert Ultra 汇总敏感性为 56.1%(95%CI 39.1 至 71.7;200 名参与者;中等确定性证据),特异性为 98.0%(95%CI 93.3 至 99.4;1232 名参与者;高确定性证据)。鼻咽抽吸物,4 项研究经培养验证的 Xpert Ultra 汇总敏感性为 43.7%(95%CI 26.7 至 62.2;46 名参与者;极低确定性证据),特异性为 97.5%(95%CI 93.6 至 99.0;489 名参与者;高确定性证据)。与培养参考标准相比,除鼻咽抽吸物外,所有标本类型的 Xpert Ultra 敏感性均低于复合参考标准,而特异性相似。结果解释:理论上,在 1000 名儿童的人群中:

  • 100 名患有肺结核的儿童(经培养):
  • 101 例 Xpert Ultra 阳性,其中 26 例(26%)无肺结核(假阳性);
  • 899 例 Xpert Ultra 阴性,其中 25 例(3%)患有结核病(假阴性)。
  • 100 名患有肺结核的儿童(经培养):
  • 123 例 Xpert Ultra 阳性,其中 53 例(43%)无肺结核(假阳性);
  • 877 例 Xpert Ultra 阴性,其中 30 例(3%)患有结核病(假阴性)。
  • 100 名患有肺结核的儿童(经培养):
  • 74 例 Xpert Ultra 阳性,其中 18 例(24%)无肺结核(假阳性);
  • 926 例 Xpert Ultra 阴性,其中 44 例(5%)患有结核病(假阴性)。
  • 100 名患有肺结核的儿童(经培养):
  • 66 例 Xpert Ultra 阳性,其中 22 例(33%)无肺结核(假阳性);
  • 934 例 Xpert Ultra 阴性,其中 56 例(6%)患有结核病(假阴性)。检测利福平耐药性:Xpert Ultra 敏感性为 100%(3 项研究,3 名参与者;低确定性证据),特异性范围为 97%至 100%(3 项研究,128 名参与者;低确定性证据)。痕量结果:Xpert Ultra 痕量结果,根据世卫组织标准,被认为在儿童中为阳性,在儿童中很常见。尽管痕量结果的频率很高,但 Xpert Ultra 特异性在儿童中仍然很高。

作者结论:我们发现 Xpert Ultra 对不同标本类型的敏感性不同,其中以痰标本的敏感性最高,其次是胃抽吸物和粪便。鼻咽抽吸物的敏感性最低。Xpert Ultra 特异性对微生物学和复合参考标准均较高。然而,证据基础仍然有限,发现结果可能不够准确,并且可能因研究环境而异。尽管我们发现 Xpert Ultra 对利福平耐药性的检测准确,但结果是基于纳入了仅有 3 名利福平耐药儿童的三项研究得出的,因此,结果应谨慎解释。我们的研究结果支持 Xpert Ultra 作为疑似结核病儿童的初始快速分子诊断方法的使用。

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[2]
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Cochrane Database Syst Rev. 2021-8-20

[3]
The PRISMA 2020 statement: an updated guideline for reporting systematic reviews.

BMJ. 2021-3-29

[4]
Xpert Ultra versus Xpert MTB/RIF for pulmonary tuberculosis and rifampicin resistance in adults with presumptive pulmonary tuberculosis.

Cochrane Database Syst Rev. 2021-2-22

[5]
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Cochrane Database Syst Rev. 2021-1-15

[6]
A Prospective Evaluation of Xpert MTB/RIF Ultra for Childhood Pulmonary Tuberculosis in Uganda.

J Pediatric Infect Dis Soc. 2021-5-28

[7]
Xpert MTB/RIF Ultra performance in diagnosing paediatric pulmonary TB in gastric aspirates.

Int J Tuberc Lung Dis. 2021-1-1

[8]
Stool-based Xpert MTB/RIF Ultra assay as a tool for detecting pulmonary tuberculosis in children with abnormal chest imaging: A prospective cohort study.

J Infect. 2021-1

[9]
Diagnostic accuracy of Xpert MTB/RIF ultra for detection of Mycobacterium tuberculosis in children: a prospective cohort study.

Lett Appl Microbiol. 2021-3

[10]
Xpert MTB/RIF and Xpert MTB/RIF Ultra assays for active tuberculosis and rifampicin resistance in children.

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