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可视化 S 期染色体中的活跃复制区域。

Visualizing Active Replication Regions in S-Phase Chromosomes.

机构信息

Division of Diagnostic Imaging, Department of Radiology, Japan Labour Health and Safety Organization, Tokyo Rosai Hospital, Ohta-ku, Tokyo, Japan.

出版信息

Methods Mol Biol. 2023;2519:117-126. doi: 10.1007/978-1-0716-2433-3_14.

DOI:10.1007/978-1-0716-2433-3_14
PMID:36066717
Abstract

A basic question of cell biology is how DNA folds to chromosome. A number of recently accumulated evidences have suggested that folding of chromosome proceeds tightly coupled with DNA replication progresses. Drug-induced PCC is a useful tool for visualization of the interphase nuclei, in particular, S-phase, as S-phase prematurely condensed chromosomes (S-phase PCC). Active replicating DNA is labeled directly with Cy3-dUTP by bead loading method, and then S-phase nuclei is immediately condensed prematurely by calyculin A to obtain S-phase PCC. Active replicating regions on S-PCC are observed under a scanning confocal microscope. Cy3-dUTP-labeled S-phase PCCs clearly reveal the drastic transitional change of chromosome formation through S-phase, starting from a "cloudy nebula" to numerous numbers of "beads on a string" and finally to "striped arrays of banding structured chromosome" known as G- or R-banding pattern. The number, distribution, and shape of replication foci were also measured in individual subphase of S-phase; maximally ~1400 foci of 0.35 μm average radius size were scored at the beginning of S-phase, and the number is reduced to ~100 at the end of S-phase. Drug-induced PCC clearly provided the new insight that eukaryote DNA replication is tightly coupled with the chromosome condensation/compaction for construction of eukaryote higher-ordered chromosome structure.

摘要

细胞生物学的一个基本问题是 DNA 如何折叠成染色体。最近积累的大量证据表明,染色体的折叠与 DNA 复制的进展紧密相关。药物诱导的 PCC 是一种用于观察间期核的有用工具,特别是 S 期,因为 S 期过早浓缩染色体(S 期 PCC)。通过珠子加载方法,用 Cy3-dUTP 直接标记活性复制的 DNA,然后用 calyculin A 立即将 S 期核过早浓缩,以获得 S 期 PCC。在扫描共聚焦显微镜下观察 S-PCC 上的活性复制区域。用 Cy3-dUTP 标记的 S 期 PCC 清楚地揭示了染色体在 S 期通过“云状星云”到“串珠”到“带结构染色体的条纹阵列”(称为 G 带或 R 带模式)的形成的急剧转变。还在 S 期的各个亚相中测量了复制焦点的数量、分布和形状;在 S 期开始时可获得最大约 1400 个 0.35μm 平均半径大小的焦点,而在 S 期结束时数量减少到约 100 个。药物诱导的 PCC 清楚地提供了新的见解,即真核生物 DNA 复制与染色体浓缩/紧缩紧密相关,用于构建真核生物的高级染色体结构。

相似文献

1
Visualizing Active Replication Regions in S-Phase Chromosomes.可视化 S 期染色体中的活跃复制区域。
Methods Mol Biol. 2023;2519:117-126. doi: 10.1007/978-1-0716-2433-3_14.
2
Visualizing the dynamics of chromosome structure formation coupled with DNA replication.可视化与DNA复制相关的染色体结构形成动态过程。
Chromosoma. 2007 Oct;116(5):453-62. doi: 10.1007/s00412-007-0109-5. Epub 2007 May 15.
3
Description of a chromosome replication unit in individual prematurely condensed human S-phase chromosomes.单个早熟凝聚的人类S期染色体中染色体复制单元的描述。
Chromosoma. 1984;90(5):389-93. doi: 10.1007/BF00294166.
4
G2 Premature Chromosome Condensation/Chromosome Aberration Assay: Drug-Induced Premature Chromosome Condensation (PCC) Protocols and Cytogenetic Approaches in Mitotic Chromosome and Interphase Chromatin for Radiation Biology.G2期染色体早熟凝集/染色体畸变分析:辐射生物学中用于有丝分裂染色体和间期染色质的药物诱导染色体早熟凝集(PCC)方案及细胞遗传学方法。
Methods Mol Biol. 2019;1984:47-60. doi: 10.1007/978-1-4939-9432-8_6.
5
Studies of mammalian chromosome replication. II. Evidence for the existence of defined chromosome replicating units.哺乳动物染色体复制的研究。II. 存在特定染色体复制单位的证据。
Chromosoma. 1981;83(5):721-41. doi: 10.1007/BF00328530.
6
Organization of early and late replicating DNA in human chromosome territories.人类染色体区域中早期和晚期复制DNA的组织方式。
Exp Cell Res. 1999 Feb 25;247(1):176-88. doi: 10.1006/excr.1998.4311.
7
Structure and dynamics of human interphase chromosome territories in vivo.体内人类间期染色体领地的结构与动态
Hum Genet. 1998 Feb;102(2):241-51. doi: 10.1007/s004390050686.
8
The ultrastructural organization of prematurely condensed chromosomes.早熟凝集染色体的超微结构组织
J Cell Sci Suppl. 1984;1:203-21. doi: 10.1242/jcs.1984.supplement_1.13.
9
Chemical-Induced Premature Chromosome Condensation Protocol.化学诱导的染色体过早凝聚方案。
Methods Mol Biol. 2023;2519:41-51. doi: 10.1007/978-1-0716-2433-3_5.
10
Spatial distributions of early and late replicating chromatin in interphase chromosome territories.间期染色体区域中早期和晚期复制染色质的空间分布。
Exp Cell Res. 1998 Sep 15;243(2):398-407. doi: 10.1006/excr.1998.4144.

本文引用的文献

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Flow cytometric determination of cell cycle progression via direct labeling of replicated DNA.通过直接标记复制的 DNA 进行细胞周期进程的流式细胞术测定。
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