The Laboratory of Ecological Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.
The Laboratory of Clinical Pathophysiology of Critical Conditions, Federal Research and Clinical Center of Intensive Care Medicine and Rehabilitology, Moscow 107031, Russia.
Int J Mol Sci. 2022 Aug 31;23(17):9896. doi: 10.3390/ijms23179896.
Pneumonia is an acute infectious disease with high morbidity and mortality rates. Pneumonia's development, severity and outcome depend on age, comorbidities and the host immune response. In this study, we combined theoretical and experimental investigations to characterize pneumonia and its comorbidities as well as to assess the host immune response measured by TREC/KREC levels in patients with pneumonia. The theoretical study was carried out using the Columbia Open Health Data (COHD) resource, which provides access to clinical concept prevalence and co-occurrence from electronic health records. The experimental study included TREC/KREC assays in young adults (18-40 years) with community-acquired (CAP) ( = 164) or nosocomial (NP) ( = 99) pneumonia and healthy controls ( = 170). Co-occurring rates between pneumonia, sepsis, acute respiratory distress syndrome (ARDS) and some other related conditions common in intensive care units were the top among 4170, 3382 and 963 comorbidities in pneumonia, sepsis and ARDS, respectively. CAP patients had higher TREC levels, while NP patients had lower TREC/KREC levels compared to controls. Low TREC and KREC levels were predictive for the development of NP, ARDS, sepsis and lethal outcome ( in the range 0.71-0.82, in the range 0.67-0.74). TREC/KREC analysis can be considered as a potential prognostic test in patients with pneumonia.
肺炎是一种具有高发病率和死亡率的急性传染病。肺炎的发展、严重程度和结局取决于年龄、合并症和宿主的免疫反应。在这项研究中,我们结合理论和实验研究,对肺炎及其合并症进行了特征描述,并评估了肺炎患者 TREC/KREC 水平所反映的宿主免疫反应。理论研究使用了哥伦比亚开放健康数据(COHD)资源,该资源提供了电子健康记录中的临床概念流行率和共同出现情况。实验研究包括对社区获得性肺炎(CAP)(n=164)或医院获得性肺炎(NP)(n=99)的年轻成年人(18-40 岁)和健康对照者(n=170)进行 TREC/KREC 检测。在肺炎、脓毒症、急性呼吸窘迫综合征(ARDS)和一些其他在重症监护病房中常见的相关疾病中,肺炎、脓毒症和 ARDS 的 4170、3382 和 963 种合并症中,共同出现率位居前三位。与对照组相比,CAP 患者的 TREC 水平较高,而 NP 患者的 TREC/KREC 水平较低。低 TREC 和 KREC 水平可预测 NP、ARDS、脓毒症和致死性结局的发生(TREC 范围为 0.71-0.82,KREC 范围为 0.67-0.74)。TREC/KREC 分析可被视为肺炎患者的一种潜在预后检测手段。