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核糖体生命周期的黑暗面。

The dark side of the ribosome life cycle.

机构信息

Regensburg Center for Biochemistry, Biochemistry III - Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Regensburg, Germany.

出版信息

RNA Biol. 2022 Jan;19(1):1045-1049. doi: 10.1080/15476286.2022.2121421.

DOI:10.1080/15476286.2022.2121421
PMID:36082947
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9467602/
Abstract

Thanks to genetics, biochemistry, and structural biology many features of the ribosome´s life cycles in models of bacteria, eukaryotes, and some organelles have been revealed to near-atomic details. Collectively, these studies have provided a very detailed understanding of what are now well-established prototypes for ribosome biogenesis and function as viewed from a 'classical' model organisms perspective. However, very important challenges remain ahead to explore the functional and structural diversity of both ribosome biogenesis and function across the biological diversity on earth. Particularly, the 'third domain of life', the archaea, and also many non-model bacterial and eukaryotic organisms have been comparatively neglected. Importantly, characterizing these additional biological systems will not only offer a yet untapped window to enlighten the evolution of ribosome biogenesis and function but will also help to unravel fundamental principles of molecular adaptation of these central cellular processes.

摘要

得益于遗传学、生物化学和结构生物学的发展,在细菌、真核生物和一些细胞器的模型中,核糖体的生命周期的许多特征已经被揭示到近原子的细节。总的来说,这些研究为核糖体生物发生和功能提供了一个非常详细的理解,从“经典”模式生物的角度来看,这些都是现在已经确立的原型。然而,要探索地球上生物多样性的核糖体生物发生和功能的功能和结构多样性,仍然面临着非常重要的挑战。特别是“生命的第三领域”——古菌,以及许多非模式细菌和真核生物,相对来说被忽视了。重要的是,对这些额外的生物系统进行特征描述不仅将提供一个尚未开发的窗口,以阐明核糖体生物发生和功能的进化,还将有助于揭示这些核心细胞过程分子适应的基本原理。

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The dark side of the ribosome life cycle.核糖体生命周期的黑暗面。
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Special focus on the ribosome life cycle.特别关注核糖体的生命周期。
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Understudied proteins: opportunities and challenges for functional proteomics.研究不足的蛋白质:功能蛋白质组学面临的机遇与挑战
Nat Methods. 2022 Jul;19(7):774-779. doi: 10.1038/s41592-022-01454-x.
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An open invitation to the Understudied Proteins Initiative.向未充分研究蛋白质计划发出的公开邀请。
Nat Biotechnol. 2022 Jun;40(6):815-817. doi: 10.1038/s41587-022-01316-z.
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Looking through the Lens of the Ribosome Biogenesis Evolutionary History: Possible Implications for Archaeal Phylogeny and Eukaryogenesis.从核糖体生物发生进化历史的角度看:可能对古菌系统发育和真核生物发生的启示。
Mol Biol Evol. 2022 Apr 11;39(4). doi: 10.1093/molbev/msac054.
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Spotlight on FtsZ-based cell division in Archaea.古菌中基于FtsZ的细胞分裂研究聚焦
Trends Microbiol. 2022 Jul;30(7):665-678. doi: 10.1016/j.tim.2022.01.005. Epub 2022 Mar 1.
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Adaptation to genome decay in the structure of the smallest eukaryotic ribosome.最小真核核糖体结构中对基因组退化的适应。
Nat Commun. 2022 Feb 1;13(1):591. doi: 10.1038/s41467-022-28281-0.
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A Shuttle-Vector System Allows Heterologous Gene Expression in the Thermophilic Methanogen Methanothermobacter thermautotrophicus ΔH.一种穿梭载体系统可在嗜热产甲烷菌 Methanothermobacter thermautotrophicus ΔH 中实现异源基因表达。
mBio. 2021 Dec 21;12(6):e0276621. doi: 10.1128/mBio.02766-21. Epub 2021 Nov 23.
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Tracing Eukaryotic Ribosome Biogenesis Factors Into the Archaeal Domain Sheds Light on the Evolution of Functional Complexity.将真核生物核糖体生物发生因子追溯到古菌域有助于揭示功能复杂性的进化。
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