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Robust joint registration of multiple stains and MRI for multimodal 3D histology reconstruction: Application to the Allen human brain atlas.多模态 3D 组织学重建的多染色和 MRI 的稳健联合配准:Allen 人类大脑图谱的应用。
Med Image Anal. 2022 Jan;75:102265. doi: 10.1016/j.media.2021.102265. Epub 2021 Oct 16.
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In vivo high-resolution structural MRI-based atlas of human thalamic nuclei.基于活体高分辨率结构 MRI 的人类丘脑核图谱。
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Ex vivo MRI atlas of the human medial temporal lobe: characterizing neurodegeneration due to tau pathology.人类内侧颞叶的离体 MRI 图谱:特征性tau 病理学所致神经退行性变。
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A deep learning toolbox for automatic segmentation of subcortical limbic structures from MRI images.一个用于从 MRI 图像自动分割皮质下边缘结构的深度学习工具箱。
Neuroimage. 2021 Dec 1;244:118610. doi: 10.1016/j.neuroimage.2021.118610. Epub 2021 Sep 25.
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A Survey of Unsupervised Deep Domain Adaptation.无监督深度域适应研究
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Surface-based hippocampal subfield segmentation.基于表面的海马亚区分割。
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高分辨率皮质下图谱构建和分割:机器学习带来的挑战和机遇综述及展望。

High-resolution atlasing and segmentation of the subcortex: Review and perspective on challenges and opportunities created by machine learning.

机构信息

Centre for Medical Image Computing, Department of Medical Physics and Biomedical Engineering, University College London, UK.

Centre for Medical Image Computing, Department of Medical Physics and Biomedical Engineering, University College London, UK; Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, USA; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Boston, USA.

出版信息

Neuroimage. 2022 Nov;263:119616. doi: 10.1016/j.neuroimage.2022.119616. Epub 2022 Sep 6.

DOI:10.1016/j.neuroimage.2022.119616
PMID:36084858
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11534291/
Abstract

This paper reviews almost three decades of work on atlasing and segmentation methods for subcortical structures in human brain MRI. In writing this survey, we have three distinct aims. First, to document the evolution of digital subcortical atlases of the human brain, from the early MRI templates published in the nineties, to the complex multi-modal atlases at the subregion level that are available today. Second, to provide a detailed record of related efforts in the automated segmentation front, from earlier atlas-based methods to modern machine learning approaches. And third, to present a perspective on the future of high-resolution atlasing and segmentation of subcortical structures in in vivo human brain MRI, including open challenges and opportunities created by recent developments in machine learning.

摘要

本文回顾了近三十年在人类大脑 MRI 的皮质下结构图谱和分割方法方面的工作。在撰写这篇综述时,我们有三个明确的目标。首先,记录人脑的数字化皮质下图谱的演变过程,从 90 年代早期发表的早期 MRI 模板,到如今可用的复杂的多模态亚区图谱。其次,详细记录自动分割方面的相关工作,从早期基于图谱的方法到现代机器学习方法。第三,对未来活体人脑 MRI 中皮质下结构的高分辨率图谱和分割提出展望,包括机器学习最新进展所带来的挑战和机遇。