Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.
Department of Biological Sciences, University at Albany, Albany, NY 12222.
Proc Natl Acad Sci U S A. 2022 Sep 20;119(38):e2123529119. doi: 10.1073/pnas.2123529119. Epub 2022 Sep 12.
Cells respond to environmental stress by regulating gene expression at the level of both transcription and translation. The ∼50 modified ribonucleotides of the human epitranscriptome contribute to the latter, with mounting evidence that dynamic regulation of transfer RNA (tRNA) wobble modifications leads to selective translation of stress response proteins from codon-biased genes. Here we show that the response of human hepatocellular carcinoma cells to arsenite exposure is regulated by the availability of queuine, a micronutrient and essential precursor to the wobble modification queuosine (Q) on tRNAs reading GUN codons. Among oxidizing and alkylating agents at equitoxic concentrations, arsenite exposure caused an oxidant-specific increase in Q that correlated with up-regulation of proteins from codon-biased genes involved in energy metabolism. Limiting queuine increased arsenite-induced cell death, altered translation, increased reactive oxygen species levels, and caused mitochondrial dysfunction. In addition to demonstrating an epitranscriptomic facet of arsenite toxicity and response, our results highlight the links between environmental exposures, stress tolerance, RNA modifications, and micronutrients.
细胞通过在转录和翻译水平上调节基因表达来应对环境压力。人类外转录组的约 50 种修饰核糖核苷酸有助于后者,越来越多的证据表明,tRNA(转运 RNA)摆动修饰的动态调节导致了来自密码子偏向基因的应激反应蛋白的选择性翻译。在这里,我们表明人类肝癌细胞对亚砷酸盐暴露的反应受 Queuine 的可用性调节,Queuine 是一种微量营养素,也是 tRNA 上阅读 GUN 密码子的摆动修饰 Queuosine(Q)的必需前体。在等毒性浓度的氧化和烷化剂中,亚砷酸盐暴露导致 Q 的特异性增加,这与参与能量代谢的密码子偏向基因的蛋白质上调相关。限制 Queuine 会增加亚砷酸盐诱导的细胞死亡、改变翻译、增加活性氧水平,并导致线粒体功能障碍。除了证明亚砷酸盐毒性和反应的外转录组学方面外,我们的结果还强调了环境暴露、应激耐受、RNA 修饰和微量营养素之间的联系。