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吡唑、咪唑和三唑:针对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的计算机模拟、对接及药物代谢动力学/药物毒性动力学研究

Pyrazole, imidazole and triazole: In silico, docking and ADMET studies against SARS-CoV-2.

作者信息

Mohamed Mounir, Abrigach Farid, El Kadiri Sghir, Omar Said Hassane Said, Abdellattif Magda H, Touzani Rachid

机构信息

University Mohammed Premier, Faculty of Sciences, Department of Chemistry, Laboratory of Applied Chemistry and Environment (LCAE), Oujda, Morocco.

University of Comoros 2, Faculty of Sciences and Technology, Comoros.

出版信息

Mater Today Proc. 2023;72:3686-3695. doi: 10.1016/j.matpr.2022.09.060. Epub 2022 Sep 9.

Abstract

The Coronavirus pandemic, Covid-19 and SARS-Cov-2 put multidisciplinary research by chemists, biologists, pharmacists and theorists necessary and primordial task to find new active biomolecules which will be beneficial for all humanity. The azoles drugs are electronic rich, they should be used with caution, and an understanding of their pharmacokinetic profile, safety, absorption, distribution, excretion, metabolism, toxicity, and drug-drug interaction profiles is important to provide effective and cure therapy. In these objectives and goals, twenty aromatic nitrogen heterocycle compounds were chosen for in silico, docking and AMET studies against SARS-CoV-2. In this paper with respect to the protein S of SARS-CoV-2 properties, the GAUSSIAN 09w program used in the semi-empirical method at the AM1 level with the optimization of the geometry of the structures. Then Toxicity and physicochemical properties were evaluated by AMET. Molecular docking investigations conducted; the binding affinities as well as interactions of the sieve compounds with the SRAS-CoV-2 protein Spike using PyRx software. In general, the preliminary results are fructuous and needs further in vitro testes.

摘要

冠状病毒大流行、新冠病毒病(Covid-19)和严重急性呼吸综合征冠状病毒2(SARS-CoV-2)使化学家、生物学家、药剂师和理论家开展多学科研究成为寻找对全人类有益的新型活性生物分子的必要且首要任务。唑类药物电子云密度高,使用时应谨慎,了解其药代动力学特征、安全性、吸收、分布、排泄、代谢、毒性以及药物相互作用特征对于提供有效治疗和治愈方案至关重要。为实现这些目标,选择了20种芳香族氮杂环化合物进行针对SARS-CoV-2的计算机模拟、对接和自动代谢估算技术(AMET)研究。在本文中,针对SARS-CoV-2的刺突蛋白(S蛋白)特性,使用GAUSSIAN 09w程序在半经验方法的AM1水平下对结构几何进行优化。然后通过AMET评估毒性和理化性质。进行了分子对接研究;使用PyRx软件研究筛选化合物与SARS-CoV-2刺突蛋白的结合亲和力以及相互作用。总体而言,初步结果未取得成效,需要进一步进行体外试验。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aed/9458701/5ba124300d39/gr1_lrg.jpg

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