AEON.py: Python library for attractor analysis in asynchronous Boolean networks.

SUMMARY

AEON.py is a Python library for the analysis of the long-term behaviour in very large asynchronous Boolean networks. It provides significant computational improvements over the state-of-the-art methods for attractor detection. Furthermore, it admits the analysis of partially specified Boolean networks with uncertain update functions. It also includes techniques for identifying viable source-target control strategies and the assessment of their robustness with respect to parameter perturbations.

AVAILABILITY AND IMPLEMENTATION

All relevant results are available in Supplementary Materials. The tool is accessible through https://github.com/sybila/biodivine-aeon-py.

SUPPLEMENTARY INFORMATION

Supplementary data are available at Bioinformatics online.