Cui Xiaowen, Liu Yang, Xu Yajie, Chen Tuo, Zhang Songlin, Wang Jinxiu, Yang Ruiqi, Liu Guangxiu, Zhang Wei, Zhang Gaosen
College of Geography and Environment Science, Northwest Normal University, Lanzhou 730070, Gansu Province, PR China.
Key Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, Gansu Province, PR China.
Int J Syst Evol Microbiol. 2022 Sep;72(9). doi: 10.1099/ijsem.0.005562.
A bacterial strain, designated S8-55, was isolated from moraine samples collected from the north slope of Mount Everest at an altitude of 5 500 m above sea level. The purpose of this study was to describe a novel species and its characteristics, through genome sequencing and analysis of the relationship between the members of the genus , and explore the antioxidant capacity of strain S8-55. The polyphasic study confirmed the affiliation of strain S8-55 with the genus . Strain S8-55 was aerobic, Gram-negative and oxidase- and catalase positive. Cells were orange-pigmented, ellipsoid and had no spore formation, no flagella and no motility. Strain S8-55 grow at 10-37 °C, pH 7-11 and without NaCl. Ubiquinone 10 was its predominant respiratory menaquinone. The polar lipids of strain S8-55 were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified phospholipid, an unidentified aminolipid and three unidentified lipids. Its major fatty acids were summed feature 8 (C 7 and/or C 6). The G+C content was 64.3 mol%. The phylogenetic analysis based on the 16S rRNA sequence showed that strain S8-55 was closely related to E6 (97.9 %), 011410 (97.9 %) and THG-T2.8 (97.8 %). The average nucleotide identity values among strain S8-55 and CCTCC AB 2015056, KCTC 42845 and CCTCC AB 2016181 were 84.1, 84.5 and 76.3 %, respectively. The genome of strain S8-55 contained antioxidant genes such as , , , and . Based on its morphological, physiological and chemical taxonomic characteristics, strain S8-55 (=JCM 35 227=GDMCC 1.3026) should be classified as a novel species of the genus with the proposed name sp. nov.
从海拔5500米的珠穆朗玛峰北坡采集的冰碛样本中分离出一株细菌菌株,命名为S8-55。本研究的目的是通过基因组测序和分析该属成员之间的关系来描述一个新物种及其特征,并探索菌株S8-55的抗氧化能力。多相研究证实了菌株S8-55与该属的归属关系。菌株S8-55为需氧菌,革兰氏阴性,氧化酶和过氧化氢酶呈阳性。细胞呈橙色,椭圆形,不形成芽孢,无鞭毛,无运动性。菌株S8-55在10-37°C、pH值7-11且无氯化钠的条件下生长。泛醌10是其主要的呼吸甲基萘醌。菌株S8-55的极性脂质为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、一种未鉴定的磷脂、一种未鉴定的氨基脂质和三种未鉴定的脂质。其主要脂肪酸为总和特征8(C17:1ω6c和/或C16:1ω7c)。G+C含量为64.3mol%。基于16S rRNA序列的系统发育分析表明,菌株S8-55与E6(97.9%)、011410(97.9%)和THG-T2.8(97.8%)密切相关。菌株S8-55与CCTCC AB 2015056、KCTC 42845和CCTCC AB 2016181之间的平均核苷酸同一性值分别为84.1%、84.5%和76.3%。菌株S8-55的基因组包含抗氧化基因,如、、、和。基于其形态、生理和化学分类特征,菌株S8-55(=JCM 35227=GDMCC 1.3026)应被归类为该属的一个新物种,提议命名为sp. nov. 。 (注:原文中部分基因名称未给出具体内容,翻译时保留原文格式)