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基于肽的碳纳米管生物传感器实现通用DNA检测。

Universal DNA detection realized by peptide based carbon nanotube biosensors.

作者信息

Li Wenjun, Gao Yubo, Zhang Jiaona, Wang Xiaofang, Yin Feng, Li Zigang, Zhang Min

机构信息

State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School Shenzhen 518055 P. R. China

School of Electronic and Computer Engineering, Peking University Shenzhen Graduate School Shenzhen 518055 China

出版信息

Nanoscale Adv. 2019 Nov 21;2(2):717-723. doi: 10.1039/c9na00625g. eCollection 2020 Feb 18.

Abstract

Although DNA recognition has been achieved using numerous biosensors with various sensing probes, the utilization of bio-interaction between DNA and biomolecules has seldom been reported in universal DNA detection. Peptides as natural molecules have the unique ability to bind to universal DNA and excellent selectivity for DNA after being functionalized with specific groups. In this work, we report a peptide based carbon nanotube (CNT) thin-film-transistor (TFT) biosensor, which can achieve sensitive sequence-independent DNA detection. In the presence of DNA, a significant increase of ΔIon could be observed within 5 minutes, which was considered to be due to the electrostatic adsorption between the DNA and peptide of opposite zeta potential. With the gradual increase of the concentration of DNA, the ΔIon signals agree with the Hill-Langmuir model ( = 0.98), indicating a negatively cooperative interaction between the peptide and DNA (the Hill coefficient < 1). Compared with the former reported universal DNA bio-detector and NanoDrop (a spectrometer from Thermo Scientific™), this unique peptide based CNT-DNA sensor demonstrated a broader sensing range from nearly 1.6 × 10 to 5 μmol L and a much lower detection limit of approximately 0.88 μg L. For the quantification of cDNA from T47D cancer cells, this unique peptide based CNT sensor could achieve efficient cDNA detection. To the best of our knowledge, this is the first report on the utilization of a peptide as a sensing element in the design of CNT based DNA biosensors, which enables highly efficient universal DNA detection.

摘要

尽管使用众多带有各种传感探针的生物传感器已实现了DNA识别,但在通用DNA检测中,DNA与生物分子之间生物相互作用的利用却鲜有报道。肽作为天然分子,具有与通用DNA结合的独特能力,在用特定基团功能化后对DNA具有出色的选择性。在这项工作中,我们报道了一种基于肽的碳纳米管(CNT)薄膜晶体管(TFT)生物传感器,它可以实现灵敏的非序列依赖性DNA检测。在存在DNA的情况下,5分钟内可观察到ΔIon显著增加,这被认为是由于具有相反zeta电位的DNA与肽之间的静电吸附所致。随着DNA浓度的逐渐增加,ΔIon信号符合Hill-Langmuir模型( = 0.98),表明肽与DNA之间存在负协同相互作用(Hill系数 < 1)。与先前报道的通用DNA生物检测器和NanoDrop(赛默飞世尔科技™的一种光谱仪)相比,这种独特的基于肽的CNT-DNA传感器展示了更宽的检测范围,从近1.6×10到5 μmol/L,检测限低得多,约为0.88 μg/L。对于T47D癌细胞cDNA的定量分析,这种独特的基于肽的CNT传感器可以实现高效的cDNA检测。据我们所知,这是首次报道在基于CNT的DNA生物传感器设计中利用肽作为传感元件,从而实现高效的通用DNA检测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/092c/9417745/44ceff54f9f0/c9na00625g-f1.jpg

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