Wei Lan, Ventura Soraia, Ryan Mary Anne, Mathieson Sean, Boylan Geraldine B, Lowery Madeleine, Mooney Catherine
UCD School of Computer Science, University College Dublin, Dublin, Ireland.
Department of Paediatrics & Child Health, University College Cork, Cork, Ireland; INFANT Research Centre, University College Cork, Cork, Ireland.
Comput Biol Med. 2022 Nov;150:106096. doi: 10.1016/j.compbiomed.2022.106096. Epub 2022 Sep 15.
Sleep spindles are an indicator of the development and integrity of the central nervous system in infants. Identifying sleep spindles manually in EEG is time-consuming and typically requires experienced experts. Automated detection of sleep spindles would greatly facilitate this analysis. Deep learning methods have been widely used recently in EEG analysis.
We have developed a deep learning-based automated sleep spindle detection system, Deep-spindle, which employs a convolutional neural network (CNN) combined with a bidirectional Long Short-Term Memory (LSTM) network, which could assist in the analysis of infant sleep spindles. Deep-spindle was trained on the EEGs of ex-term infants to estimate the number and duration of sleep spindles. The ex-term EEG on channel F4-C4 was split into training (N=81) and validation (N=30) sets. An additional 30 ex-term EEG and 54 ex-preterm infant EEGs (channel F4-C4 and F3-C3) were used as an independent test set.
Deep-spindle detected the number of sleep spindles with 91.9% to 96.5% sensitivity and 95.3% to 96.7% specificity, and estimated sleep spindle duration with a percent error of 13.1% to 19.1% in the independent test set. For each detected spindle event, the user is presented with amplitude, power spectral density and the spectrogram of the corresponding spindle EEG, and the probability of the event being a sleep spindle event, providing the user with insight into why the event is predicted as a sleep spindle to provide confidence in the predictions.
The Deep-spindle system can reduce physicians' workload, demonstrating the potential to assist physicians in the automated analysis of sleep spindles in infants.
睡眠纺锤波是婴儿中枢神经系统发育和完整性的一个指标。在脑电图(EEG)中手动识别睡眠纺锤波很耗时,通常需要经验丰富的专家。睡眠纺锤波的自动检测将极大地促进这一分析。深度学习方法最近在EEG分析中得到了广泛应用。
我们开发了一种基于深度学习的自动睡眠纺锤波检测系统Deep-spindle,它采用卷积神经网络(CNN)与双向长短期记忆(LSTM)网络相结合的方式,可协助分析婴儿睡眠纺锤波。Deep-spindle在足月儿的EEG上进行训练,以估计睡眠纺锤波的数量和持续时间。将通道F4-C4上的足月儿EEG分为训练集(N = 81)和验证集(N = 30)。另外30份足月儿EEG和54份早产儿EEG(通道F4-C4和F3-C3)用作独立测试集。
在独立测试集中,Deep-spindle检测睡眠纺锤波数量的灵敏度为91.9%至96.5%,特异性为95.3%至96.7%,估计睡眠纺锤波持续时间的百分比误差为13.1%至19.1%。对于每个检测到的纺锤波事件,会向用户呈现相应纺锤波EEG的幅度、功率谱密度和频谱图,以及该事件为睡眠纺锤波事件的概率,让用户深入了解该事件被预测为睡眠纺锤波的原因,从而对预测结果有信心。
Deep-spindle系统可以减轻医生的工作量,显示出协助医生对婴儿睡眠纺锤波进行自动分析的潜力。