Department of Molecular and Cellular Biology, Harvard University, Cambridge MA 02138, USA.
G3 (Bethesda). 2022 Nov 4;12(11). doi: 10.1093/g3journal/jkac252.
RNA interference is sequence-specific gene silencing triggered by double-stranded RNA. Systemic RNA interference is where double-stranded RNA, expressed or introduced into 1 cell, is transported to and initiates RNA interference in other cells. Systemic RNA interference is very efficient in Caenorhabditis elegans and genetic screens for systemic RNA interference-defective mutants have identified RNA transporters (SID-1, SID-2, and SID-5) and a signaling protein (SID-3). Here, we report that SID-4 is nck-1, a C. elegans NCK-like adaptor protein. sid-4 null mutations cause a weak, dose-sensitive, systemic RNA interference defect and can be effectively rescued by SID-4 expression in target tissues only, implying a role in double-stranded RNA import. SID-4 and SID-3 (ACK-1 kinase) homologs interact in mammals and insects, suggesting that they may function in a common signaling pathway; however, a sid-3; sid-4 double mutants showed additive resistance to RNA interference, suggesting that these proteins likely interact with other signaling pathways as well. A bioinformatic screen coupled to RNA interference sensitivity tests identified 23 additional signaling components with weak RNA interference-defective phenotypes. These observations suggest that environmental conditions may modulate systemic RNA interference efficacy, and indeed, sid-3 and sid-4 are required for growth temperature effects on systemic RNA interference silencing efficiency.
RNA 干扰是双链 RNA 触发的序列特异性基因沉默。系统性 RNA 干扰是指双链 RNA 在 1 个细胞中表达或引入后,被运输到其他细胞并引发 RNA 干扰。系统性 RNA 干扰在秀丽隐杆线虫中非常有效,并且系统性 RNA 干扰缺陷突变体的遗传筛选已经鉴定出 RNA 转运蛋白(SID-1、SID-2 和 SID-5)和一种信号蛋白(SID-3)。在这里,我们报告 SID-4 是 nck-1,一种秀丽隐杆线虫 NCK 样衔接蛋白。sid-4 缺失突变导致弱的、剂量敏感的系统性 RNA 干扰缺陷,并且仅在靶组织中表达 SID-4 就可以有效挽救,这表明它在双链 RNA 导入中起作用。SID-4 和 SID-3(ACK-1 激酶)的同源物在哺乳动物和昆虫中相互作用,表明它们可能在共同的信号通路中发挥作用;然而,sid-3;sid-4 双突变体对 RNA 干扰表现出相加抗性,这表明这些蛋白可能与其他信号通路相互作用。一个结合 RNA 干扰敏感性测试的生物信息学筛选鉴定出了另外 23 个具有弱 RNA 干扰缺陷表型的信号成分。这些观察结果表明,环境条件可能会调节系统性 RNA 干扰的效果,事实上,sid-3 和 sid-4 是生长温度对系统性 RNA 干扰沉默效率影响所必需的。