Institute of Food Engineering, University of Szeged, Mars tér 7, Szeged HU-6724, Hungary.
Department of Medical Chemistry, University of Szeged, Dóm tér 8, Szeged HU-6720, Hungary.
J Chem Inf Model. 2022 Oct 24;62(20):4963-4969. doi: 10.1021/acs.jcim.2c00667. Epub 2022 Oct 3.
Cationic antimicrobial peptide PGLa gets into close contact with the anionic bacterial cell membrane, facilitating cross-membrane transport phenomena and membrane disruption depending on the concentration. The mechanisms of action are closely associated with the tilted insertion geometry of PGLa. Therefore, we aimed to understand the interaction between the transmembrane potential (TMP) and the orientation of the membrane-bound PGLa helix. Molecular dynamics simulations were performed with TMP, and we found that the PGLa tilt angle relative to the membrane is coupled with the TMP. Elevated TMP increases the population of the tilted state. We observed positive feedback between the tilt angle and the TMP, which occurs due to the electrostatic interaction between the peptidic helix and the Na cations at the membrane-water interface. These TMP coupled phenomena can contribute to understanding the direct antimicrobial and adjuvant effects of PGLa in combination with regular antibiotics.
阳离子抗菌肽 PGLa 与带负电荷的细菌细胞膜紧密接触,根据浓度促进跨膜转运现象和膜破坏。作用机制与 PGLa 的倾斜插入几何形状密切相关。因此,我们旨在了解跨膜电位 (TMP) 和膜结合 PGLa 螺旋取向之间的相互作用。进行了带有 TMP 的分子动力学模拟,我们发现 PGLa 相对于膜的倾斜角度与 TMP 相关。升高的 TMP 增加了倾斜状态的种群。我们观察到倾斜角度和 TMP 之间存在正反馈,这是由于肽螺旋和膜-水界面处的 Na 阳离子之间的静电相互作用引起的。这些与 TMP 相关的现象有助于理解 PGLa 与常规抗生素联合使用的直接抗菌和佐剂作用。