Institut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.
PROTEO, the Quebec Network for Research on Protein Function, Engineering, and Applications, Université Laval, Québec, Quebec, Canada.
Microbiol Spectr. 2022 Oct 26;10(5):e0129022. doi: 10.1128/spectrum.01290-22. Epub 2022 Oct 6.
Secretion of high-molecular-weight polysaccharides across the bacterial envelope is ubiquitous, as it enhances prokaryotic survival in (a)biotic settings. Such polymers are often assembled by Wzx/Wzy- or ABC transporter-dependent schemes implicating outer membrane (OM) polysaccharide export (OPX) proteins in cell-surface polymer translocation. In the social predatory bacterium Myxococcus xanthus, the exopolysaccharide (EPS) pathway WzaX, major spore coat (MASC) pathway WzaS, and biosurfactant polysaccharide (BPS) pathway WzaB were herein found to be truncated OPX homologues of Escherichia coli Wza lacking OM-spanning α-helices. Comparative genomics across all bacteria (>91,000 OPX proteins identified and analyzed), complemented with cryo-electron tomography cell-envelope analyses, revealed such "truncated" WzaX/S/B architecture to be the most common among three defined OPX-protein structural classes independent of periplasm thickness. Fold recognition and deep learning revealed the conserved M. xanthus proteins MXAN_7418/3226/1916 (encoded beside , respectively) to be integral OM β-barrels, with structural homology to the poly--acetyl-d-glucosamine synthase-dependent pathway porin PgaA. Such bacterial porins were identified near numerous genes for all three OPX protein classes. Interior MXAN_7418/3226/1916 β-barrel electrostatics were found to match properties of their associated polymers. With MXAN_3226 essential for MASC export, and MXAN_7418 herein shown to mediate EPS translocation, we have designated this new secretion machinery component "Wzp" (i.e., orin), with the final step of M. xanthus EPS/MASC/BPS secretion across the OM now proposed to be mediated by WzpX/S/B (i.e., MXAN_7418/3226/1916). Importantly, these data support a novel and widespread secretion paradigm for polysaccharide biosynthesis pathways in which those containing OPX components that cannot span the OM instead utilize β-barrel porins to mediate polysaccharide transport across the OM. Diverse bacteria assemble and secrete polysaccharides that alter their physiologies through modulation of motility, biofilm formation, and host immune system evasion. Most such pathways require outer membrane (OM) polysaccharide export (OPX) proteins for sugar-polymer transport to the cell surface. In the prototypic Escherichia coli Group-1-capsule biosynthesis system, eight copies of this canonical OPX protein cross the OM with an α-helix, forming a polysaccharide-export pore. Herein, we instead reveal that most OPX proteins across all bacteria lack this α-helix, raising questions as to the manner by which most secreted polysaccharides actually exit cells. In the model developmental bacterium Myxococcus xanthus, we show this process to depend on OPX-coupled OM-spanning β-barrel porins, with similar porins encoded near numerous OPX genes in diverse bacteria. Knowledge of the terminal polysaccharide secretion step will enable development of antimicrobial compounds targeted to blocking polymer export from outside the cell, thus bypassing any requirements for antimicrobial compound uptake by the cell.
细菌包膜的高分子量多糖分泌是普遍存在的,因为它增强了原核生物在(生)物环境中的生存能力。这种聚合物通常由 Wzx/Wzy 或 ABC 转运体依赖性方案组装,涉及外膜(OM)多糖出口(OPX)蛋白在细胞表面聚合物转运中的作用。在社会捕食细菌粘细菌中,发现外多糖(EPS)途径 WzaX、主要孢子壳(MASC)途径 WzaS 和生物表面活性剂多糖(BPS)途径 WzaB 是大肠杆菌 Wza 的截短 OPX 同源物,缺乏 OM 跨越的α-螺旋。对所有细菌(>91,000 个 OPX 蛋白的鉴定和分析)进行比较基因组学分析,并辅以冷冻电子断层扫描细胞包膜分析,揭示了这种“截短”的 WzaX/S/B 结构是三种定义的 OPX 蛋白结构类别的最常见结构,与周质厚度无关。构象识别和深度学习揭示了保守的粘细菌蛋白 MXAN_7418/3226/1916(分别在旁边编码)是完整的 OM β-桶,与多聚--乙酰-d-葡萄糖胺合酶依赖性途径孔蛋白 PgaA 具有结构同源性。在许多 OPX 蛋白类别的基因附近都发现了这种细菌孔蛋白。发现内部 MXAN_7418/3226/1916β-桶的静电特性与它们相关的聚合物的特性相匹配。由于 MXAN_3226 对于 MASC 出口是必需的,并且 MXAN_7418 本文证明介导 EPS 易位,我们将这个新的分泌机制组件命名为"Wzp"(即, 或 in),并且现在提出粘细菌 EPS/MASC/BPS 穿过 OM 的最后一步是由 WzpX/S/B(即,MXAN_7418/3226/1916)介导的。重要的是,这些数据支持多糖生物合成途径中一种新的和广泛的分泌范例,其中包含 OPX 成分的那些不能跨越 OM,而是利用β-桶孔蛋白来介导多糖穿过 OM 的运输。 不同的细菌组装并分泌多糖,通过调节运动性、生物膜形成和宿主免疫系统逃避来改变其生理机能。大多数此类途径都需要外膜(OM)多糖出口(OPX)蛋白将糖聚合物运输到细胞表面。在原核生物大肠杆菌组-1-荚膜生物合成系统中,这种典型的 OPX 蛋白的八个副本穿过 OM 并带有一个α-螺旋,形成一个多糖出口孔。在这里,我们反而揭示了所有细菌中的大多数 OPX 蛋白都缺乏这种α-螺旋,这引发了关于大多数分泌多糖实际上如何离开细胞的问题。在模型发育细菌粘细菌中,我们表明这个过程依赖于 OPX 偶联的 OM 跨越β-桶孔蛋白,在不同细菌的许多 OPX 基因附近都有类似的孔蛋白编码。了解多糖的最终分泌步骤将能够开发针对阻止聚合物从细胞外部出口的抗菌化合物,从而绕过细胞摄取抗菌化合物的任何要求。