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基于神经相关基因的子宫内膜癌重新分类及关键基因鉴定

Reclassification of endometrial cancer and identification of key genes based on neural-related genes.

作者信息

Chen Fan, Qin Tiansheng, Zhang Yigan, Wei Linzhen, Dang Yamei, Liu Peixia, Jin Weilin

机构信息

The First Clinical Medical College of Gansu University of Chinese Medicine (Gansu Provincial Hospital), Lanzhou, China.

Key Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.

出版信息

Front Oncol. 2022 Sep 23;12:951437. doi: 10.3389/fonc.2022.951437. eCollection 2022.

Abstract

Endometrial cancer (EC) is the most common gynecologic malignancy, and its incidence has been increasing every year. Nerve signaling is part of the tumor microenvironment and plays an active role in tumor progression and invasion. However, the relationship between the expression of neural-related genes (NRGs) and prognosis in endometrial cancer remains unknown. In this study, we obtained RNA sequencing data of EC from The Cancer Genome Atlas (TCGA). Endometrial cancer was classified into two subtypes based on the expression of neural-associated genes (NRGs), with statistical differences in clinical stage, pathological grading, and prognosis. A prognostic prediction model was established by LASSO-Cox analysis, and the results showed that high expression of NRGs was associated with poor survival prognosis. Further, CHRM2, GRIN1, L1CAM, and SEMA4F were found to be significantly associated with clinical stage, immune infiltration, immune response, and important signaling pathways in endometrial cancer. The reclassification of endometrial cancer based on NRG expression would be beneficial for future clinical practice. The genes CHRM2, GRIN1, L1CAM, and SEMA4F might serve as potential biomarkers of EC prognosis.

摘要

子宫内膜癌(EC)是最常见的妇科恶性肿瘤,其发病率逐年上升。神经信号传导是肿瘤微环境的一部分,在肿瘤进展和侵袭中发挥着积极作用。然而,神经相关基因(NRGs)的表达与子宫内膜癌预后之间的关系尚不清楚。在本研究中,我们从癌症基因组图谱(TCGA)获得了EC的RNA测序数据。根据神经相关基因(NRGs)的表达将子宫内膜癌分为两种亚型,在临床分期、病理分级和预后方面存在统计学差异。通过LASSO-Cox分析建立了预后预测模型,结果表明NRGs的高表达与不良生存预后相关。此外,发现CHRM2、GRIN1、L1CAM和SEMA4F与子宫内膜癌的临床分期、免疫浸润、免疫反应和重要信号通路显著相关。基于NRG表达对子宫内膜癌进行重新分类将有利于未来的临床实践。CHRM2、GRIN1、L1CAM和SEMA4F基因可能作为EC预后的潜在生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d778/9537575/d866ee83cdc5/fonc-12-951437-g001.jpg

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