Delgado M Angélica, Cáceres Omar A, Calderón John E, Balda Lourdes, Sotil Giovanna, Céspedes Manuel J
National Reference Laboratory of Bacterial Zoonoses, National Institute of Health, Lima, Peru.
Faculty of Biological Sciences, National University of San Marcos, Lima, Peru.
J Trop Med. 2022 Sep 22;2022:4184326. doi: 10.1155/2022/4184326. eCollection 2022.
Leptospirosis is a zoonotic disease caused by the genus presenting complex and dynamic epidemiology. To determine the genetic variability and its phylogenetic relationship of spp isolates from three sources in Iquitos (Peruvian Amazon) from 2002 to 2013, seven MLST genes were analyzed to obtain the (ST) and these sequences were concatenated for phylogenetic analysis. The genetic relationship between STs was determined with the goeBURST algorithm and genetic diversity was determined using DnaSP. Of 51 isolates, 48 were pathogenic belonging to five different species: Nascimento 2004, Feil 2004 Haake 2021, Levett 2021, and Levett 2021. Of 20 STs identified, 60% corresponded to new genotypes circulating only in Peru. The genotypes ST17, ST37, and ST301 were recorded in rodents and humans. A high intraspecific genetic diversity was demonstrated in . The goeBURST analysis revealed three clonal complexes (CCs) and 16 singletons. The STs were found to show high genetic variability and phylogenetic and goeBURST analysis determined that the genotypes found did not form specific groups according to the source of infection or origin, which confirms the zoonotic potential of these STs in an area highly endemic for leptospirosis.
钩端螺旋体病是一种由钩端螺旋体属引起的人畜共患病,其流行病学复杂且动态变化。为了确定2002年至2013年来自伊基托斯(秘鲁亚马逊地区)三个来源的钩端螺旋体菌株的遗传变异性及其系统发育关系,分析了七个多位点序列分型(MLST)基因以获得序列类型(ST),并将这些序列连接起来进行系统发育分析。使用goeBURST算法确定ST之间的遗传关系,并使用DnaSP确定遗传多样性。在51株分离株中,48株具有致病性,属于五个不同物种:2004年的纳西门托钩端螺旋体、2004年费尔钩端螺旋体、2021年哈克钩端螺旋体、2021年莱维特钩端螺旋体和2021年莱维特钩端螺旋体。在鉴定出的20种ST中,60%对应于仅在秘鲁流行的新基因型。ST17、ST37和ST301基因型在啮齿动物和人类中均有记录。钩端螺旋体显示出较高的种内遗传多样性。goeBURST分析揭示了三个克隆复合体(CCs)和16个单倍型。发现ST显示出高遗传变异性,系统发育和goeBURST分析确定,根据感染源或起源,所发现的基因型并未形成特定群体,这证实了这些ST在钩端螺旋体病高度流行地区的人畜共患病潜力。