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纯化的 Spf1p 的 ATP 水解活性与胶束脂质流动性相关,并且依赖于跨膜螺旋 M1 中的保守残基。

ATP hydrolytic activity of purified Spf1p correlate with micellar lipid fluidity and is dependent on conserved residues in transmembrane helix M1.

机构信息

Center for Membrane Pumps in Cells and Disease-PUMPKIN, Danish National Research Foundation, Copenhagen, Denmark.

Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg C, Denmark.

出版信息

PLoS One. 2022 Oct 20;17(10):e0274908. doi: 10.1371/journal.pone.0274908. eCollection 2022.

DOI:10.1371/journal.pone.0274908
PMID:36264897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9584430/
Abstract

P5A ATPases are expressed in the endoplasmic reticulum (ER) of all eukaryotic cells, and their disruption results in pleiotropic phenotypes related to severe ER stress. They were recently proposed to function in peptide translocation although their specificity have yet to be confirmed in reconstituted assays using the purified enzyme. A general theme for P-type ATPases is that binding and transport of substrates is coupled to hydrolysis of ATP in a conserved allosteric mechanism, however several independent reports have shown purified Spf1p to display intrinsic spontaneous ATP hydrolytic activity after purification. It has never been determined to what extend this spontaneous activity is caused by uncoupling of the enzyme. In this work we have purified a functional tagged version of the Saccharomyces cerevisiae P5A ATPase Spf1p and have observed that the intrinsic ATP hydrolytic activity of the purified and re-lipidated protein can be stimulated by specific detergents (C12E8, C12E10 and Tween20) in mixed lipid/detergent micelles in the absence of any apparent substrate. We further show that this increase in activity correlate with the reaction temperature and the anisotropic state of the mixed lipid/detergent micelles and further that this correlation relies on three highly conserved phenylalanine residues in M1. This suggests that at least part of the intrinsic ATP hydrolytic activity is allosterically coupled to movements in the TM domain in the purified preparations. It is suggested that free movement of the M1 helix represent an energetic constraint on catalysis and that this constraint likely is lost in the purified preparations resulting in protein with intrinsic spontaneous ATP hydrolytic activity. Removal of the N-terminal part of the protein apparently removes this activity.

摘要

P5A ATP 酶在所有真核细胞的内质网 (ER) 中表达,其功能障碍会导致与严重 ER 应激相关的多种表型。最近有人提出,它们在肽转运中起作用,尽管在使用纯化酶的重组测定中尚未证实其特异性。P 型 ATP 酶的一个普遍主题是,底物的结合和转运与在保守的变构机制中 ATP 的水解偶联,然而,有几个独立的报告表明,纯化的 Spf1p 在纯化后显示出内在的自发 ATP 水解活性。从未确定这种自发活性在多大程度上是由酶的解偶联引起的。在这项工作中,我们纯化了功能标记的酿酒酵母 P5A ATP 酶 Spf1p,并观察到纯化和重新脂化的蛋白的内在 ATP 水解活性可以被特定的去污剂(C12E8、C12E10 和 Tween20)在没有任何明显底物的情况下在混合脂质/去污剂胶束中刺激。我们进一步表明,这种活性的增加与反应温度和混合脂质/去污剂胶束的各向异性状态相关,进一步表明这种相关性依赖于 M1 中的三个高度保守的苯丙氨酸残基。这表明至少部分内在的 ATP 水解活性与 TM 结构域在纯化制剂中的运动变构偶联。有人提出,M1 螺旋的自由运动代表了对催化的能量限制,而这种限制在纯化制剂中可能会丢失,导致具有内在自发 ATP 水解活性的蛋白质。显然,去除蛋白质的 N 端部分会去除这种活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/f54b460d358d/pone.0274908.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/053128c01cbe/pone.0274908.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/096703b4c2ed/pone.0274908.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/32e45609d75e/pone.0274908.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/909a4337a763/pone.0274908.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/5e16aefaf9ae/pone.0274908.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/a5fbb4eb2eb5/pone.0274908.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/f54b460d358d/pone.0274908.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/053128c01cbe/pone.0274908.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/096703b4c2ed/pone.0274908.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/32e45609d75e/pone.0274908.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/909a4337a763/pone.0274908.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/5e16aefaf9ae/pone.0274908.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/a5fbb4eb2eb5/pone.0274908.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74d0/9584430/f54b460d358d/pone.0274908.g007.jpg

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