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非裔美国人中差异甲基化 DNA 区域与左心室肥厚:HyperGEN 研究。

Differentially Methylated DNA Regions and Left Ventricular Hypertrophy in African Americans: A HyperGEN Study.

机构信息

Department of Epidemiology, School of Public Health, University of Alabama-Birmingham, Birmingham, AL 35233, USA.

Department of Biostatistics, School of Public Health, University of Alabama-Birmingham, Birmingham, AL 35233, USA.

出版信息

Genes (Basel). 2022 Sep 22;13(10):1700. doi: 10.3390/genes13101700.

DOI:10.3390/genes13101700
PMID:36292585
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9601679/
Abstract

Left ventricular (LV) hypertrophy (LVH) is an independent risk factor for cardiovascular disease, and African Americans experience a disparate high risk of LVH. Genetic studies have identified potential candidate genes and variants related to the condition. Epigenetic modifications may continue to help unravel disease mechanisms. We used methylation and echocardiography data from 636 African Americans selected from the Hypertension Genetic Epidemiology Network (HyperGEN) to identify differentially methylated regions (DMRs) associated with LVH. DNA extracted from whole blood was assayed on Illumina Methyl450 arrays. We fit linear mixed models to examine associations between co-methylated regions and LV traits, and we then conducted single CpG analyses within significant DMRs. We identified associations between DMRs and ejection fraction (), LV internal diastolic dimension (), LV mass index (, , ), and relative wall thickness (). In single CpG analysis, CpG sites annotated to and were significant. These CpGs were not associated with LV traits in replication cohorts but the direction of effect for was consistent across cohorts. Of note, , , and may contribute to cardiac structural function. Future studies should evaluate relationships between regional DNA methylation patterns and the development of LVH.

摘要

左心室(LV)肥大(LVH)是心血管疾病的独立危险因素,非裔美国人患 LVH 的风险极高。遗传研究已经确定了与该疾病相关的潜在候选基因和变体。表观遗传修饰可能有助于进一步揭示疾病机制。我们使用了从高血压遗传流行病学网络(HyperGEN)中选择的 636 名非裔美国人的甲基化和超声心动图数据,以确定与 LVH 相关的差异甲基化区域(DMR)。从全血中提取的 DNA 在 Illumina Methyl450 阵列上进行了检测。我们拟合了线性混合模型,以研究共甲基化区域与 LV 特征之间的关联,然后在显著的 DMR 内进行了单个 CpG 分析。我们确定了 DMR 与射血分数()、LV 内部舒张期尺寸()、LV 质量指数(,,)和相对壁厚度()之间的关联。在单 CpG 分析中,注释到和的 CpG 位点具有显著性。这些 CpG 位点在复制队列中与 LV 特征没有关联,但在整个队列中,的效应方向是一致的。值得注意的是,、和可能有助于心脏结构功能。未来的研究应评估局部 DNA 甲基化模式与 LVH 发展之间的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d1/9601679/4038793e0388/genes-13-01700-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d1/9601679/75977b8b68ed/genes-13-01700-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d1/9601679/4038793e0388/genes-13-01700-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d1/9601679/75977b8b68ed/genes-13-01700-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21d1/9601679/4038793e0388/genes-13-01700-g002.jpg

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High Blood Press Cardiovasc Prev. 2020 Dec;27(6):515-526. doi: 10.1007/s40292-020-00408-8. Epub 2020 Sep 22.
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Different Patterns of Left Ventricular Hypertrophy in Metabolically Healthy and Insulin-Resistant Obese Subjects.代谢健康型和胰岛素抵抗型肥胖患者左心室肥厚的不同模式。
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