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蝼蛄科蝼蛄的线粒体基因组比较及其系统发育意义(直翅目:螽亚目)

Mitogenomic Comparison of the Mole Crickets Gryllotalpidae with the Phylogenetic Implications (Orthoptera: Ensifera).

作者信息

Ma Yan, Miao Ying

机构信息

College of Agriculture, Ningxia University, Yinchuan 750021, China.

出版信息

Insects. 2022 Oct 11;13(10):919. doi: 10.3390/insects13100919.

Abstract

Owing to limited molecular data, the phylogenetic position of the family Gryllotalpidae is still controversial in the infraorder Gryllidea. Mitochondrial genome (mitogenome) plays a crucial role in reconstructing phylogenetic relationships and revealing the molecular evolution of insects. However, only four mitogenomes have been reported in Gryllotalpidae to date. Herein, we obtained the first mitogenomes of Cai & Niu, 1998 and the Chinese Burmeister, 1838, made a detailed comparison of all mitogenomes available in Gryllotalpidae and reconstructed the phylogeny of Gryllidea based on mitogenomes using Bayesian inference (BI) and maximum likelihood (ML) methods. The results show that the complete mitogenome sequences of (15,504 bp) and (15,497 bp) are conserved, both exhibiting the double-stranded circular structure, typical gene content and the ancestral insect gene arrangement. The complete mitogenome of exhibits the lowest average AT content ever detected in Gryllotalpidae, and even Gryllidea. The gene of both species has atypical initiation codon GTG. All tRNAs exhibit typical clover-leaf structure, except for lacking the dihydrouridine (DHU) arm. A potential stem-loop structure, containing a (T)(TC)(T) sequence, is detected in the control region of all gryllotalpids investigated and is likely related to the replication initiation of the minority strand. The phylogenetic analyses recover the six families of Gryllidea as Gryllotalpidae + (Myrmecophilidae + (Mogoplistidae + (Trigonidiidae + (Phalangopsidae + Gryllidae)))), similar to the trees based on transcriptomic and mitogenomic data. However, the trees are slightly different from the multilocus phylogenies, which show the sister-group relationship of Gryllotalpidae and Myrmecophilidae. The contradictions between mitogenomic and multilocus trees are briefly discussed.

摘要

由于分子数据有限,蝼蛄科在蟋蟀亚目中的系统发育位置仍存在争议。线粒体基因组(mitogenome)在重建系统发育关系和揭示昆虫分子进化方面起着至关重要的作用。然而,迄今为止,蝼蛄科仅报道了四个线粒体基因组。在此,我们获得了蔡 & 牛,1998 年及中华伯麦斯特,1838 年的首个线粒体基因组,对蝼蛄科所有可用的线粒体基因组进行了详细比较,并使用贝叶斯推断(BI)和最大似然(ML)方法基于线粒体基因组重建了蟋蟀亚目的系统发育。结果表明,(15,504 bp)和 (15,497 bp)的完整线粒体基因组序列是保守的,两者均呈现双链环状结构、典型的基因组成和昆虫祖先的基因排列。 的完整线粒体基因组在蝼蛄科甚至蟋蟀亚目中显示出有史以来检测到的最低平均 AT 含量。两个物种的 基因都具有非典型起始密码子 GTG。所有 tRNA 均呈现典型的三叶草结构,但 缺少二氢尿嘧啶(DHU)臂。在所有研究的蝼蛄科昆虫的控制区域中检测到一个潜在的茎环结构,其包含(T)(TC)(T)序列,可能与少数链的复制起始有关。系统发育分析将蟋蟀亚目的六个科恢复为蝼蛄科 +(蚁蟋科 +(短翅蟋科 +(棱胸蟋科 +(驼螽科 + 蟋蟀科)))),类似于基于转录组和线粒体基因组数据的树。然而,这些树与多位点系统发育树略有不同,后者显示蝼蛄科和蚁蟋科为姐妹群关系。本文简要讨论了线粒体基因组树和多位点树之间的矛盾。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c36b/9604337/0f8e31899ed5/insects-13-00919-g001.jpg

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