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循环 U13 小核仁 RNA 作为亨廷顿病的潜在生物标志物:一项初步研究。

Circulating U13 Small Nucleolar RNA as a Potential Biomarker in Huntington's Disease: A Pilot Study.

机构信息

Department of Neurosciences, Mental Health and Sensory Organs, Sant'Andrea Hospital, Sapienza University of Rome, 00189 Rome, Italy.

Department of Human Neurosciences, Sant'Andrea Hospital, Sapienza University of Rome, 00189 Rome, Italy.

出版信息

Int J Mol Sci. 2022 Oct 18;23(20):12440. doi: 10.3390/ijms232012440.

Abstract

Plasma small RNAs have been recently explored as biomarkers in Huntington’s disease (HD). We performed an exploratory study on nine HD patients, eight healthy subjects (HS), and five psychiatric patients (PP; to control for iatrogenic confounder effects) through an Affymetrix-Gene-Chip-miRNA-Array. We validated the results in an independent population of 23 HD, 15 pre-HD, 24 PP, 28 Alzheimer’s disease (AD) patients (to control the disease-specificity) and 22 HS through real-time PCR. The microarray results showed higher levels of U13 small nucleolar RNA (SNORD13) in HD patients than controls (fold change 1.54, p = 0.003 HD vs. HS, and 1.44, p = 0.0026 HD vs. PP). In the validation population, a significant increase emerged with respect to both pre-HD and the control groups (p < 0.0001). SNORD13 correlated with the status of the mutant huntingtin carrier (r = 0.73; p < 0.001) and the disease duration (r = 0.59; p = 0.003). The receiver operating characteristic (ROC) curve analysis showed the high accuracy of SNORD13 in discriminating HD patients from other groups (AUC = 0.963). An interactome and pathway analysis on SNORD13 revealed enrichments for factors relevant to HD pathogenesis. We report the unprecedented finding of a potential disease-specific role of SNORD13 in HD. It seems to peripherally report a ‘tipping point’ in the pathogenic cascade at the neuronal level.

摘要

血浆小 RNA 最近被探索作为亨廷顿病 (HD) 的生物标志物。我们通过 Affymetrix-Gene-Chip-miRNA-Array 对 9 名 HD 患者、8 名健康对照者 (HS) 和 5 名精神科患者 (PP) 进行了一项探索性研究,以控制医源性混杂因素的影响。我们通过实时 PCR 在一个独立的 23 名 HD 患者、15 名前 HD 患者、24 名 PP 患者、28 名阿尔茨海默病 (AD) 患者和 22 名 HS 中验证了结果,以控制疾病特异性。微阵列结果显示,HD 患者的 U13 小核仁 RNA (SNORD13) 水平高于对照组 (fold change 1.54, p = 0.003 HD 与 HS 相比,和 1.44, p = 0.0026 HD 与 PP 相比)。在验证人群中,与前 HD 组和对照组相比,SNORD13 显著增加 (p < 0.0001)。SNORD13 与突变亨廷顿蛋白携带者的状态相关 (r = 0.73; p < 0.001) 和疾病持续时间相关 (r = 0.59; p = 0.003)。接收器操作特性 (ROC) 曲线分析显示,SNORD13 区分 HD 患者和其他组的准确性很高 (AUC = 0.963)。对 SNORD13 的互作网络和通路分析显示,其与 HD 发病机制相关的因素富集。我们报告了一个前所未有的发现,即 SNORD13 在 HD 中具有潜在的疾病特异性作用。它似乎在神经元水平的致病级联反应中报告了一个“临界点”。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f46/9604297/6b29973df812/ijms-23-12440-g001.jpg

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