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用于核磁共振代谢组学中代谢物鉴定的聚类分析统计光谱学

Cluster Analysis Statistical Spectroscopy for the Identification of Metabolites in H NMR Metabolomics.

作者信息

Heinzmann Silke S, Waldenberger Melanie, Peters Annette, Schmitt-Kopplin Philippe

机构信息

Research Unit Analytical BioGeoChemistry, Helmholtz Munich, 85764 Neuherberg, Germany.

German Center for Diabetes Research (DZD), 85764 Neuherberg, Germany.

出版信息

Metabolites. 2022 Oct 19;12(10):992. doi: 10.3390/metabo12100992.

Abstract

Metabolite identification in non-targeted NMR-based metabolomics remains a challenge. While many peaks of frequently occurring metabolites are assigned, there is a high number of unknowns in high-resolution NMR spectra, hampering biological conclusions for biomarker analysis. Here, we use a cluster analysis approach to guide peak assignment via statistical correlations, which gives important information on possible structural and/or biological correlations from the NMR spectrum. Unknown peaks that cluster in close proximity to known peaks form hypotheses for their metabolite identities, thus, facilitating metabolite annotation. Subsequently, metabolite identification based on a database search, 2D NMR analysis and standard spiking is performed, whereas without a hypothesis, a full structural elucidation approach would be required. The approach allows a higher identification yield in NMR spectra, especially once pathway-related subclusters are identified.

摘要

基于非靶向核磁共振的代谢组学中的代谢物鉴定仍然是一项挑战。虽然许多常见代谢物的峰已被归属,但高分辨率核磁共振谱中仍有大量未知物,这妨碍了生物标志物分析的生物学结论。在此,我们使用聚类分析方法通过统计相关性来指导峰的归属,这从核磁共振谱中给出了关于可能的结构和/或生物学相关性的重要信息。与已知峰紧密聚集的未知峰形成了它们代谢物身份的假设,从而便于代谢物注释。随后,基于数据库搜索、二维核磁共振分析和标准加样进行代谢物鉴定,而没有假设的话,则需要完整的结构解析方法。该方法在核磁共振谱中具有更高的鉴定率,特别是一旦识别出与途径相关的子聚类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af07/9607017/bf50a78d06a2/metabolites-12-00992-g001.jpg

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