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肝细胞癌领域单细胞测序技术的进展

Advances in single-cell sequencing technology in the field of hepatocellular carcinoma.

作者信息

Qin Rongyi, Zhao Haichao, He Qizu, Li Feng, Li Yanjun, Zhao Haoliang

机构信息

Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Taiyuan, China.

Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Third Hospital of Shanxi Medical University, Taiyuan, China.

出版信息

Front Genet. 2022 Oct 11;13:996890. doi: 10.3389/fgene.2022.996890. eCollection 2022.

Abstract

Tumors are a class of diseases characterized by altered genetic information and uncontrolled growth. Sequencing technology provide researchers with a better way to explore specific tumor pathogenesis. In recent years, single-cell sequencing technology has shone in tumor research, especially in the study of liver cancer, revealing phenomena that were unexplored by previous studies. Single-cell sequencing (SCS) is a technique for sequencing the cellular genome, transcriptome, epigenome, proteomics, or metabolomics after dissociation of tissues into single cells. Compared with traditional bulk sequencing, single-cell sequencing can dissect human tumors at single-cell resolution, finely delineate different cell types, and reveal the heterogeneity of tumor cells. In view of the diverse pathological types and complex pathogenesis of hepatocellular carcinoma (HCC), the study of the heterogeneity among tumor cells can help improve its clinical diagnosis, treatment and prognostic judgment. On this basis, SCS has revolutionized our understanding of tumor heterogeneity, tumor immune microenvironment, and clonal evolution of tumor cells. This review summarizes the basic process and development of single-cell sequencing technology and its increasing role in the field of hepatocellular carcinoma.

摘要

肿瘤是一类以遗传信息改变和生长失控为特征的疾病。测序技术为研究人员探索特定肿瘤发病机制提供了更好的方法。近年来,单细胞测序技术在肿瘤研究中大放异彩,尤其是在肝癌研究中,揭示了以往研究未探索到的现象。单细胞测序(SCS)是一种在将组织解离成单细胞后对细胞基因组、转录组、表观基因组、蛋白质组或代谢组进行测序的技术。与传统的批量测序相比,单细胞测序能够以单细胞分辨率剖析人类肿瘤,精细地描绘不同细胞类型,并揭示肿瘤细胞的异质性。鉴于肝细胞癌(HCC)病理类型多样且发病机制复杂,研究肿瘤细胞间的异质性有助于改善其临床诊断、治疗及预后判断。在此基础上,单细胞测序彻底改变了我们对肿瘤异质性、肿瘤免疫微环境及肿瘤细胞克隆进化的理解。本文综述了单细胞测序技术的基本过程、发展及其在肝细胞癌领域日益重要的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cadb/9592975/5cd49e18ff92/fgene-13-996890-g001.jpg

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