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深入了解CCT3在人类肿瘤中的作用及驱动因素。

Insights into the roles and driving forces of CCT3 in human tumors.

作者信息

Ma Jingang, Song Ping, Liu Xinling, Ma Changgeng, Zheng Mingzhu, Ren Xiaomin, Wang Rui, Liu Wenshan, Lu Zhong, Li Jiaqiu

机构信息

Department of Oncology, Affiliated Hospital of Weifang Medical University, School of Clinical Medicine, Weifang Medical University, Weifang, China.

Department of Gastroenterology, Affiliated Hangzhou First People's Hospital, Medical School of Zhejiang University, Hangzhou, China.

出版信息

Front Pharmacol. 2022 Oct 12;13:1005855. doi: 10.3389/fphar.2022.1005855. eCollection 2022.

Abstract

CCT3 played a key role in many cancers. This study aimed to further explore the characteristics of CCT3 from a pan-cancer perspective and reveal the driving forces for CCT3. By bioinformatic analysis, we found that the mRNA and protein levels of CCT3 were abnormally elevated in most tumor types and were correlated with poor prognosis. Single-cell sequencing data indicated an abnormal increase of CCT3 expression in both malignant cells and multiple immune cells. In the tumor microenvironment, CCT3 expression was negatively relevant with immune cell infiltration and immune checkpoint genes expression. In colon cancer, knockdown of CCT3 inhibited cell proliferation. Gene set enrichment analysis showed that CCT3 may be oncogenic by regulating amino acid metabolism. Furthermore, we predicted sensitive drugs for CCT3 by virtual screening and sensitivity analysis. Many driver genes such as TP53 and KRAS were essential for CCT3 overexpression. Epigenetic factors, enhancers in particular, were also critical for CCT3 expression. Additionally, we constructed the lncRNA/circRNA-miRNA-CCT3 regulatory network. Collectively, CCT3 had the potential to be a diagnostic and prognostic biomarker for multiple tumor types. CCT3 expression was relevant with an immunosuppressive tumor microenvironment. CCT3 could be a new molecular target for colon cancer. Both genetic and epigenetic factors were responsible for CCT3 expression in tumors.

摘要

CCT3在多种癌症中发挥关键作用。本研究旨在从泛癌角度进一步探究CCT3的特征,并揭示CCT3的驱动因素。通过生物信息学分析,我们发现CCT3的mRNA和蛋白质水平在大多数肿瘤类型中异常升高,且与预后不良相关。单细胞测序数据表明,CCT3在恶性细胞和多种免疫细胞中的表达均异常增加。在肿瘤微环境中,CCT3表达与免疫细胞浸润及免疫检查点基因表达呈负相关。在结肠癌中,敲低CCT3可抑制细胞增殖。基因集富集分析表明,CCT3可能通过调节氨基酸代谢发挥致癌作用。此外,我们通过虚拟筛选和敏感性分析预测了针对CCT3的敏感药物。许多驱动基因,如TP53和KRAS,对CCT3的过表达至关重要。表观遗传因素,尤其是增强子,对CCT3的表达也至关重要。此外,我们构建了lncRNA/circRNA-miRNA-CCT3调控网络。总体而言,CCT3有潜力成为多种肿瘤类型的诊断和预后生物标志物。CCT3表达与免疫抑制性肿瘤微环境相关。CCT3可能是结肠癌的一个新分子靶点。遗传和表观遗传因素均对肿瘤中CCT3的表达起作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/95d2/9596777/162bae8c8ecb/fphar-13-1005855-g001.jpg

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