Institut de Ciència de Materials de Barcelona, ICMAB-CSIC, Campus de la UAB, Bellaterra, Catalonia 08193, Spain.
Acta Crystallogr A Found Adv. 2022 Nov 1;78(Pt 6):473-481. doi: 10.1107/S2053273322008622. Epub 2022 Oct 10.
Owing to the importance of the single-wavelength anomalous diffraction (SAD) technique, the recently developed |ρ|-based phasing algorithm (S) incorporating the inner-pixel preservation (ipp) procedure [Rius & Torrelles (2021). Acta Cryst A77, 339-347] has been adapted to the determination of anomalous scattering substructures and its applicability tested on a series of 12 representative experimental data sets, mostly retrieved from the Protein Data Bank. To give an idea of the suitability of the data sets, the main indicators measuring their quality are also given. The dominant anomalous scatterers are either SeMet or S atoms, or metals/clusters incorporated by soaking. The resulting SAD-adapted algorithm solves the substructures of the test protein crystals quite efficiently.
鉴于单波长反常散射(SAD)技术的重要性,最近开发的基于 |ρ|的相位确定算法(S)结合了内像素保留(ipp)程序[Rius & Torrelles(2021)。 Acta Cryst A77,339-347]已被应用于确定反常散射亚结构,并在一系列 12 个具有代表性的实验数据集上进行了适用性测试,这些数据集主要来自蛋白质数据库。为了说明数据集的适用性,还给出了衡量其质量的主要指标。主要的反常散射体是硒代甲硫氨酸或 S 原子,或者是通过浸泡方式掺入的金属/簇。由此产生的 SAD 适配算法可以非常有效地解决测试蛋白晶体的亚结构问题。