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使用集成优化策略进行密度泛函理论(DFT)和从头算分子动力学(AIMD)计算的硫银锗矿构型确定

Argyrodite configuration determination for DFT and AIMD calculations using an integrated optimization strategy.

作者信息

Lee Byung Do, Lee Jin-Woong, Park Joonseo, Cho Min Young, Park Woon Bae, Sohn Kee-Sun

机构信息

Faculty of Nanotechnology and Advanced Materials Engineering, Sejong University Seoul 05006 Republic of Korea

Department of Advanced Components and Materials Engineering, Sunchon National University Chonnam 57922 Republic of Korea

出版信息

RSC Adv. 2022 Oct 31;12(48):31156-31166. doi: 10.1039/d2ra05889h. eCollection 2022 Oct 27.

DOI:10.1039/d2ra05889h
PMID:36349042
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9620773/
Abstract

When constructing a partially occupied model structure for use in density functional theory (DFT) and molecular dynamics (AIMD) calculations, the selection of appropriate configurations has been a vexing issue. Random sampling and the ensuing low-Coulomb-energy entry selection have been routine. Here, we report a more efficient way of selecting low-Coulomb-energy configurations for a representative solid electrolyte, LiPSCl. Metaheuristics (genetic algorithm, particle swarm optimization, cuckoo search, and harmony search), Bayesian optimization, and modified deep Q-learning are utilized to search the large configurational space. Ten configuration candidates that exhibit relatively low Coulomb energy values and thereby lead to more convincing DFT and AIMD calculation results are pinpointed along with computational cost savings by the assistance of the above-described optimization algorithms, which constitute an integrated optimization strategy. Consequently, the integrated optimization strategy outperforms the conventional random sampling-based selection strategy.

摘要

在构建用于密度泛函理论(DFT)和分子动力学(AIMD)计算的部分占据模型结构时,选择合适的构型一直是个棘手的问题。随机抽样以及随后选择低库仑能的构型是常规做法。在此,我们报告了一种为代表性固体电解质LiPSCl选择低库仑能构型的更有效方法。利用元启发式算法(遗传算法、粒子群优化、布谷鸟搜索和和声搜索)、贝叶斯优化和改进的深度Q学习来搜索庞大的构型空间。通过上述优化算法的辅助,找出了十个具有相对较低库仑能值的构型候选,从而得到更具说服力的DFT和AIMD计算结果,同时还节省了计算成本,这构成了一种综合优化策略。因此,该综合优化策略优于传统的基于随机抽样的选择策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/326464f2cbd4/d2ra05889h-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/72733f019d89/d2ra05889h-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/e67b8c4fc9e6/d2ra05889h-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/c6452c54a92c/d2ra05889h-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/34144cab6e68/d2ra05889h-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/326464f2cbd4/d2ra05889h-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/72733f019d89/d2ra05889h-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/e67b8c4fc9e6/d2ra05889h-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/c6452c54a92c/d2ra05889h-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/34144cab6e68/d2ra05889h-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aa0/9620773/326464f2cbd4/d2ra05889h-f5.jpg

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2
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Angew Chem Int Ed Engl. 2019 Jun 24;58(26):8681-8686. doi: 10.1002/anie.201814222. Epub 2019 May 24.
3
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4
Facile Synthesis toward the Optimal Structure-Conductivity Characteristics of the Argyrodite LiPSCl Solid-State Electrolyte.朝着具有最佳结构-导电特性的方钠石型 LiPSCl 固态电解质的简易合成。
ACS Appl Mater Interfaces. 2018 Oct 3;10(39):33296-33306. doi: 10.1021/acsami.8b07476. Epub 2018 Sep 20.
5
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Inorg Chem. 2017 Aug 21;56(16):9814-9824. doi: 10.1021/acs.inorgchem.7b01341. Epub 2017 Aug 4.
6
Influence of Lattice Polarizability on the Ionic Conductivity in the Lithium Superionic Argyrodites LiPSX (X = Cl, Br, I).晶格极化率对锂超离子银盐 LiPSX(X = Cl,Br,I)离子电导率的影响。
J Am Chem Soc. 2017 Aug 9;139(31):10909-10918. doi: 10.1021/jacs.7b06327. Epub 2017 Jul 28.
7
First-principles and experimental characterization of the electronic properties of CaGaSiN and CaAlSiN: the impact of chemical disorder.
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8
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