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一种球根开花植物(1753年,林奈分类法,石蒜科)的完整叶绿体基因组序列

Complete chloroplast genome sequence of a bulbous flowering plant, Linnaeus, 1753 (Amaryllidaceae).

作者信息

Min Xiaoxiao, Li Peiling, Gong Shoufu, Zhu Qingsong

机构信息

College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China.

出版信息

Mitochondrial DNA B Resour. 2022 Nov 2;7(11):1907-1909. doi: 10.1080/23802359.2022.2135402. eCollection 2022.

DOI:10.1080/23802359.2022.2135402
PMID:36353059
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9639542/
Abstract

(Linnaeus, 1753) is a bulbous flowering plant of the genus (Amaryllidaceae), native to the Mediterranean basin, and is now widespread and invasive in different parts of the world via ornamental horticultural trade. However, to date, the genomic study of has lagged, which impedes the development of appropriate utilization and management practices for this species. Here, we report the complete chloroplast genome sequence of . The chloroplast genome size of was 153,298 bp, consisting of a pair of inverted repeat regions (26,547 bp), separated by a large single-copy (82,875 bp) region and a small single-copy (17,329 bp) region. Genome annotation predicted 133 genes, including 87 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on 60 whole chloroplast genome sequences of species suggested that and are sister to each other along with the clade of , , and .

摘要

(林奈,1753年)是(石蒜科)属的一种球根开花植物,原产于地中海盆地,现在通过观赏园艺贸易在世界不同地区广泛分布且具有侵入性。然而,迄今为止,对其的基因组研究滞后,这阻碍了针对该物种制定适当的利用和管理措施。在此,我们报告了的完整叶绿体基因组序列。的叶绿体基因组大小为153,298 bp,由一对反向重复区域(26,547 bp)组成,被一个大单拷贝(82,875 bp)区域和一个小单拷贝(17,329 bp)区域隔开。基因组注释预测有133个基因,包括87个蛋白质编码基因、38个tRNA基因和8个rRNA基因。基于60个物种完整叶绿体基因组序列的系统发育分析表明,与以及、和的分支一起互为姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3377/9639542/3fb0e3a784a8/TMDN_A_2135402_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3377/9639542/3fb0e3a784a8/TMDN_A_2135402_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3377/9639542/3fb0e3a784a8/TMDN_A_2135402_F0001_B.jpg

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