• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

文殊兰的完整叶绿体基因组序列()。 (原文括号部分内容缺失,译文按原样呈现)

The complete chloroplast genome sequence of Magic Lily ().

作者信息

Jin Seung Woo, Park Jee Young, Kang Shin-Jae, Park Hyun-Seung, Shim Hyeonah, Lee Taek Joo, Kang Jung Hwa, Sung Sang Hyun, Yang Tae-Jin

机构信息

Department of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Korea.

Hantaek Botanical Garden, Yongin, Korea.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 26;3(2):1210-1211. doi: 10.1080/23802359.2018.1527193.

DOI:10.1080/23802359.2018.1527193
PMID:33474468
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7799502/
Abstract

Magic Lily (), belonging to the Amaryllidaceae family, is cultivated for ornamental and medicinal purposes. To characterize its genomic information, we obtained the complete chloroplast genome sequence of by assembling Illumina whole genome sequence data. The complete chloroplast genome is 158,482 bp in length which is composed of four unique regions, a large single copy region (LSC) of 86,454 bp, a small single copy region (SSC) of 18,500 bp, and a pair of inverted repeats (IR) of 26,764 bp. The genome annotation predicted 159 genes including 105 protein-coding genes, 46 genes, and 8 genes. Phylogenetic tree analysis revealed that clustered with species belonging to the Amaryllidaceae family.

摘要

魔百合(),属于石蒜科,因其观赏和药用价值而被种植。为了表征其基因组信息,我们通过组装Illumina全基因组序列数据获得了其完整的叶绿体基因组序列。完整的叶绿体基因组长度为158,482 bp,由四个独特区域组成,一个86,454 bp的大单拷贝区域(LSC),一个18,500 bp的小单拷贝区域(SSC),以及一对26,764 bp的反向重复序列(IR)。基因组注释预测有159个基因,包括105个蛋白质编码基因、46个基因和8个基因。系统发育树分析表明,与石蒜科的 种聚在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44c3/7799502/4be0173dbd41/TMDN_A_1527193_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44c3/7799502/4be0173dbd41/TMDN_A_1527193_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44c3/7799502/4be0173dbd41/TMDN_A_1527193_F0001_B.jpg

相似文献

1
The complete chloroplast genome sequence of Magic Lily ().文殊兰的完整叶绿体基因组序列()。 (原文括号部分内容缺失,译文按原样呈现)
Mitochondrial DNA B Resour. 2018 Oct 26;3(2):1210-1211. doi: 10.1080/23802359.2018.1527193.
2
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Sep 10;4(2):2886-2887. doi: 10.1080/23802359.2019.1660265.
3
Complete chloroplast genome of (Amaryllidaceae) and genetic comparison.(石蒜科)的完整叶绿体基因组及遗传比较。
Mitochondrial DNA B Resour. 2019 Oct 15;4(2):3577-3578. doi: 10.1080/23802359.2019.1676673.
4
Characterisation of the complete chloroplast genome of (Amaryllidaceae).(石蒜科)完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2019 Oct 25;4(2):3782-3783. doi: 10.1080/23802359.2019.1681324.
5
The complete chloroplast genome of (L'Hér.) Herb.(L'Hér.)Herb.的完整叶绿体基因组
Mitochondrial DNA B Resour. 2020 Jan 24;5(1):788-789. doi: 10.1080/23802359.2020.1715296.
6
Complete Chloroplast Genomes and Comparative Analyses of , , and (Amaryllidaceae).完整的叶绿体基因组和 、 、 (石蒜科)的比较分析。
Int J Mol Sci. 2020 Aug 10;21(16):5729. doi: 10.3390/ijms21165729.
7
Characterization of the complete chloroplast genome of (Amaryllidaceae).石蒜科(石蒜属)完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):186-187. doi: 10.1080/23802359.2019.1698983.
8
The complete chloroplast genome of (Celastraceae).卫矛科(Celastraceae)植物的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2022 Apr 25;7(4):707-708. doi: 10.1080/23802359.2022.2067494. eCollection 2022.
9
The complete chloroplast genome sequence of  from Hainan of China.来自中国海南的[具体物种名称未给出]的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2019 Oct 18;4(2):3663-3664. doi: 10.1080/23802359.2019.1678438.
10
Complete chloroplast genome sequence of a bulbous flowering plant, Linnaeus, 1753 (Amaryllidaceae).一种球根开花植物(1753年,林奈分类法,石蒜科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2022 Nov 2;7(11):1907-1909. doi: 10.1080/23802359.2022.2135402. eCollection 2022.

引用本文的文献

1
Complete plastome sequence of L., one of the most iconic European plants.欧洲最具标志性的植物之一——L. 的完整质体基因组序列。
Mitochondrial DNA B Resour. 2024 Aug 22;9(8):1132-1136. doi: 10.1080/23802359.2024.2392758. eCollection 2024.
2
Navigating Amaryllidaceae alkaloids: bridging gaps and charting biosynthetic territories.探索石蒜科生物碱:弥合差距并绘制生物合成版图。
J Exp Bot. 2025 Jan 1;76(1):16-34. doi: 10.1093/jxb/erae187.
3
Complete chloroplast genomes and comparative analyses of Hippeastrum 'milady', Hippeastrum albertii and Hippeastrum reticulatum (Amaryllidaceae).

本文引用的文献

1
The complete plastid genome sequence of garlic L.大蒜(Allium sativum L.)的完整质体基因组序列
Mitochondrial DNA B Resour. 2016 Nov 12;1(1):831-832. doi: 10.1080/23802359.2016.1247669.
2
Comprehensive comparative analysis of chloroplast genomes from seven species and development of an authentication system based on species-unique single nucleotide polymorphism markers.七种植物叶绿体基因组的综合比较分析及基于物种特异性单核苷酸多态性标记的鉴定系统开发
J Ginseng Res. 2020 Jan;44(1):135-144. doi: 10.1016/j.jgr.2018.06.003. Epub 2018 Jun 22.
3
GeSeq - versatile and accurate annotation of organelle genomes.
‘蜜莱蒂’孤挺花、阿尔伯特孤挺花和网纹孤挺花的完整叶绿体基因组及比较分析(石蒜科)。
PLoS One. 2022 Aug 5;17(8):e0271335. doi: 10.1371/journal.pone.0271335. eCollection 2022.
4
Comparative plastomics of Amaryllidaceae: inverted repeat expansion and the degradation of the genes in Jacq.石蒜科的比较质体基因组学:反向重复序列扩增与水仙属植物基因的降解
PeerJ. 2021 Nov 12;9:e12400. doi: 10.7717/peerj.12400. eCollection 2021.
5
Chromosomal variations of Lycoris species revealed by FISH with rDNAs and centromeric histone H3 variant associated DNAs.利用 rDNAs 和着丝粒组蛋白 H3 变体相关 DNA 的 FISH 揭示石蒜属物种的染色体变异。
PLoS One. 2021 Sep 30;16(9):e0258028. doi: 10.1371/journal.pone.0258028. eCollection 2021.
6
Comparative Chloroplast Genomes of Four Species (Amaryllidaceae) Provides New Insight into Interspecific Relationship and Phylogeny.四种石蒜科植物叶绿体基因组比较研究为种间关系及系统发育提供新见解
Biology (Basel). 2021 Jul 27;10(8):715. doi: 10.3390/biology10080715.
7
The complete chloroplast genome of (L'Hér.) Herb.(L'Hér.)Herb.的完整叶绿体基因组
Mitochondrial DNA B Resour. 2020 Jan 24;5(1):788-789. doi: 10.1080/23802359.2020.1715296.
8
Characterisation of the complete chloroplast genome of (Amaryllidaceae).(石蒜科)完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2019 Oct 25;4(2):3782-3783. doi: 10.1080/23802359.2019.1681324.
9
Complete chloroplast genome of (Amaryllidaceae) and genetic comparison.(石蒜科)的完整叶绿体基因组及遗传比较。
Mitochondrial DNA B Resour. 2019 Oct 15;4(2):3577-3578. doi: 10.1080/23802359.2019.1676673.
10
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Sep 10;4(2):2886-2887. doi: 10.1080/23802359.2019.1660265.
GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
4
Completion of the mitochondrial genome sequence of onion (Allium cepa L.) containing the CMS-S male-sterile cytoplasm and identification of an independent event of the ccmF gene split.包含CMS-S雄性不育细胞质的洋葱(Allium cepa L.)线粒体基因组序列的完成以及ccmF基因分裂独立事件的鉴定。
Curr Genet. 2016 Nov;62(4):873-885. doi: 10.1007/s00294-016-0595-1. Epub 2016 Mar 26.
5
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
6
Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species.30个种质的完整叶绿体和核糖体序列阐明了稻属AA基因组物种的进化。
Sci Rep. 2015 Oct 28;5:15655. doi: 10.1038/srep15655.
7
Comprehensive Survey of Genetic Diversity in Chloroplast Genomes and 45S nrDNAs within Panax ginseng Species.人参叶绿体基因组和45S nrDNA的遗传多样性综合调查
PLoS One. 2015 Jun 10;10(6):e0117159. doi: 10.1371/journal.pone.0117159. eCollection 2015.
8
Amaryllidaceae and Sceletium alkaloids.石蒜科和尸茄属生物碱。
Nat Prod Rep. 2011 Jun;28(6):1126-42. doi: 10.1039/c0np00073f. Epub 2011 Apr 7.