Zhang Xiaodong, Guo Boxue, Wang Yafei, Hu Lian, Yang Ning, Mao Hanping
School of Agricultural Engineering, Jiangsu University, Zhenjiang 212013, China.
Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, Jiangsu University, Zhenjiang 212013, China.
J Fungi (Basel). 2022 Nov 5;8(11):1168. doi: 10.3390/jof8111168.
The timely monitoring of airborne crop fungal spores is important for maintaining food security. In this study, a method based on microfluidic separation and enrichment and AC impedance characteristics was proposed to detect spores of fungal pathogens that cause diseases on crops. Firstly, a microfluidic chip with tertiary structure was designed for the direct separation and enrichment of spores, spores, and spores from the air. Then, the impedance characteristics of fungal spores were measured by impedance analyzer in the enrichment area of a microfluidic chip. The impedance characteristics of fungal spores were analyzed, and four impedance characteristics were extracted: absolute value of impedance (abs), real part of impedance (real), imaginary part of impedance (imag), and impedance phase (phase). Finally, based on the impedance characteristics of extracted fungal spores, K-proximity (KNN), random forest (RF), and support vector machine (SVM) classification models were established to classify the three fungal spores. The results showed that the microfluidic chip designed in this study could well collect the spores of three fungal diseases, and the collection rate was up to 97. The average accuracy of KNN model, RF model, and SVM model for the detection of three disease spores was 93.33, 96.44 and 97.78, respectively. The F1-Score of KNN model, RF model, and SVM model was 90, 94.65, and 96.18, respectively. The accuracy, precision, recall, and F1-Score of the SVM model were all the highest, at 97.78, 96.67, 96.69, and 96.18, respectively. Therefore, the detection method of crop fungal spores based on microfluidic separation, enrichment, and impedance characteristics proposed in this study can be used for the detection of airborne crop fungal spores, providing a basis for the subsequent detection of crop fungal spores.
及时监测空气中的作物真菌孢子对于维护粮食安全至关重要。在本研究中,提出了一种基于微流控分离富集和交流阻抗特性的方法来检测导致作物病害的真菌病原体孢子。首先,设计了一种具有三级结构的微流控芯片,用于直接从空气中分离和富集孢子。然后,通过阻抗分析仪在微流控芯片的富集区域测量真菌孢子的阻抗特性。分析了真菌孢子的阻抗特性,提取了四个阻抗特性:阻抗绝对值(abs)、阻抗实部(real)、阻抗虚部(imag)和阻抗相位(phase)。最后,基于提取的真菌孢子的阻抗特性,建立了K近邻(KNN)、随机森林(RF)和支持向量机(SVM)分类模型对三种真菌孢子进行分类。结果表明,本研究设计的微流控芯片能够很好地收集三种真菌病害的孢子,收集率高达97%。KNN模型、RF模型和SVM模型检测三种病害孢子的平均准确率分别为93.33%、96.44%和97.78%。KNN模型、RF模型和SVM模型的F1分数分别为90、94.65和96.18。SVM模型的准确率、精确率、召回率和F1分数均最高,分别为97.78%、96.67%、96.69%和96.18%。因此,本研究提出的基于微流控分离、富集和阻抗特性的作物真菌孢子检测方法可用于空气中作物真菌孢子的检测,为后续作物真菌孢子的检测提供依据。