El Sherif Heba M, Elsayed Mahitab, El-Ansary Mona R, Aboshanab Khaled M, El Borhamy Mervat I, Elsayed Khaled M
Department of Microbiology, Faculty of Pharmacy, Misr International University (MIU), Cairo 19648, Egypt.
Department of Clinical Pharmacy, Faculty of Pharmacy, Modern University for Technology and Information (MTI), Cairo 12055, Egypt.
Biology (Basel). 2022 Oct 26;11(11):1573. doi: 10.3390/biology11111573.
Central line-associated bloodstream infection (CLABSI) is among the most serious hospital acquired infections. Therefore, the rapid detection of the causative microorganism is of crucial importance to allow for the appropriate antimicrobial therapy. In the present study, we analyzed the clinical performance of the BioFire FilmArray Blood Culture Identification 2 (BCID2) panel in the identification of 33 microbial species and 10 antibiotic resistance genes in comparison to the VITEK-2 system. A total of 104 blood specimens were included. The FilmArray BCID2 results were concordant with the VITEK-2 system in 69/97 specimens (71.1%). Non-concordance was either due to the detection of more pathogens by the FilmArray BCID2 23/28 (82%) or microbial species were misidentified 5/28 (18%). Hence, in comparison to the VITEK-2 system, the FilmArray BCID2 panel showed an overall sensitivity of 75.8% (95% CI, 66-83%) and an overall specificity of 98% (95% CI, 97-98.8%) in detecting microbial species. For the resistance genes, the FilmArray BCID was able to detect the presence of CTX-M gene in 23 Gram-negative isolates, NDM and OXA-48- like genes in 14 and 13 isolates, respectively. The A and C genes were found in 23 species, while A, C and MREJ genes were found in 4 isolates. The sensitivity and specificity for detecting resistance genes by the FilmArray BCID2 was 90% (95% CI, 81.4-95%) and 99.6% (95% CI, 99-100%), respectively. As concluded, the present study emphasizes the high sensitivity and specificity of the FilmArray BCID2 in the rapid and reliable detection of different bacteria and fungi from positive blood culture bottles, as well as the accurate detection of various antibiotic resistance markers.
中心静脉导管相关血流感染(CLABSI)是最严重的医院获得性感染之一。因此,快速检测致病微生物对于进行适当的抗菌治疗至关重要。在本研究中,我们分析了BioFire FilmArray血培养鉴定2(BCID2)检测板与VITEK-2系统相比,在鉴定33种微生物和10种抗生素耐药基因方面的临床性能。共纳入104份血标本。FilmArray BCID2的结果与VITEK-2系统在69/97份标本中一致(71.1%)。不一致的原因要么是FilmArray BCID2检测到更多病原体23/28(82%),要么是微生物种类被错误鉴定5/28(18%)。因此,与VITEK-2系统相比,FilmArray BCID2检测板在检测微生物种类方面的总体敏感性为75.8%(95%可信区间,66-83%),总体特异性为98%(95%可信区间,97-98.8%)。对于耐药基因,FilmArray BCID能够在23株革兰氏阴性菌中检测到CTX-M基因的存在,在14株和13株分离菌中分别检测到NDM和OXA-48样基因。A和C基因在23个菌种中被发现,而A、C和MREJ基因在4株分离菌中被发现。FilmArray BCID2检测耐药基因的敏感性和特异性分别为90%(95%可信区间,81.4-95%)和99.6%(95%可信区间,99-100%)。总之,本研究强调了FilmArray BCID2在从阳性血培养瓶中快速可靠地检测不同细菌和真菌以及准确检测各种抗生素耐药标志物方面的高敏感性和特异性。