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在实验室条件下于切尔内瓦亚泰加土壤中种植的农作物表现出根际微生物群的独特组成。

Agricultural Crops Grown in Laboratory Conditions on Chernevaya Taiga Soil Demonstrate Unique Composition of the Rhizosphere Microbiota.

作者信息

Kravchenko Irina, Rayko Mikhail, Tikhonova Ekaterina, Konopkin Aleksey, Abakumov Evgeny, Lapidus Alla

机构信息

Winogradsky Institute of Microbiology, Research Center of Biotechnology, Russian Academy of Sciences, 119071 Moscow, Russia.

Center for Bioinformatics and Algorithmic Biotechnology, St. Petersburg State University, 199034 St. Petersburg, Russia.

出版信息

Microorganisms. 2022 Oct 31;10(11):2171. doi: 10.3390/microorganisms10112171.

Abstract

Chernevaya taiga in West Siberia is a unique environment, with gigantism of grasses and shrubs. Exceptionally high productivity of plants is determined by the synergistic interaction of various factors, with a special role belonging to microorganisms colonizing the plant roots. This research explored whether agricultural plants can recruit specific microorganisms from within virgin Chernevaya Umbrisol and thus increase their productivity. Radish and wheat plants were grown on the Umbrisol (T1) and control Retisol of Scotch pine forest stand (T3) soils in the phytotron, and then a bacterial community analysis of the rhizosphere was performed using high-throughput sequencing of the 16S rRNA genes. In laboratory experiments, the plant physiological parameters were significantly higher when growing on the Umbrisol as compared to the Retisol. Bacterial diversity in T1 soil was considerably higher than in the control sample, and the principal coordinate analysis demonstrated apparent differences in the bacterial communities associated with the plants. Agricultural plants growing in the T1 soil form specific prokaryotic communities, with dominant genera and These communities also include less abundant but essential for plant growth nitrifiers and and representatives of Proteobacteria, Bacilli, and Actinobacteria, known to be gibberellin-producers.

摘要

西西伯利亚的切尔涅瓦亚泰加林是一个独特的环境,这里生长着巨大的草本植物和灌木。植物的超高生产力是由多种因素的协同作用决定的,其中定殖于植物根系的微生物起着特殊作用。本研究探讨了农作物是否能从原始的切尔涅瓦亚暗色土中招募特定微生物,从而提高其生产力。在人工气候室中,将萝卜和小麦种植在暗色土(T1)和苏格兰松林对照网纹土(T3)上,然后通过16S rRNA基因高通量测序对根际细菌群落进行分析。在实验室实验中,与网纹土相比,植物在暗色土上生长时生理参数显著更高。T1土壤中的细菌多样性远高于对照样本,主坐标分析表明与植物相关的细菌群落存在明显差异。生长在T1土壤中的农作物形成了特定的原核生物群落,优势属为 和 。这些群落还包括丰度较低但对植物生长至关重要的硝化细菌 和 ,以及已知能产生赤霉素的变形菌门、芽孢杆菌属和放线菌属的代表菌。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8fa/9695958/9c460c25e816/microorganisms-10-02171-g001.jpg

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