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CRISPR/Cas12a 与多重 RPA 的整合用于快速检测基因兴奋剂。

Integration of CRISPR/Cas12a and Multiplexed RPA for Fast Detection of Gene Doping.

机构信息

Lab of Biochemistry, School of Physical Education, China University of Geosciences, Wuhan 430074, China.

State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology - Wuhan National Laboratory for Optoelectronics, Chinese Academy of Sciences, Wuhan 430071, China.

出版信息

Anal Chem. 2022 Nov 29;94(47):16481-16490. doi: 10.1021/acs.analchem.2c04079. Epub 2022 Nov 11.

Abstract

Fast and on-site detection is important for an effective antigene-doping strategy. However, the current gene doping (GD) evaluation methods require sophisticated instruments and laborious procedures, limiting their field applications. This study proposes a CRISPR/Cas12a-based detection platform (termed CasGDP) combining CRISPR/Cas12a and multiplexed Recombinase Polymerase Amplification (RPA) for rapid evaluation of GD. CasGDP showed high specificity for identifying the putative target genes such as , , and . By using fluorescence as the readout, the method achieved a limit-of-detection of 0.1 nM and 1 aM for unamplified and amplified target plasmids, respectively. Additionally, an in vitro GD cell model was successfully established with the human gene (). The results indicated that the gene transfection promoted the protein expression. Furthermore, trace amounts of transgene spiked in human serum were efficiently measured by CasGDP with fluorescence- and lateral flow device (LFD)-based readouts in 40 min. Finally, we designed a multiplexed microfluidic device and realized simultaneous detection of the three transgenes via LFD embedded in the device. To our knowledge, this is the first work that combines the CRISPR-based system and multiplexed RPA for GD detection. We anticipate CasGDP to be widely used as a rapid, sensitive, and robust tool for GD evaluation.

摘要

快速现场检测对于有效的反基因兴奋剂策略非常重要。然而,目前的基因兴奋剂(GD)评估方法需要复杂的仪器和繁琐的程序,限制了其现场应用。本研究提出了一种基于 CRISPR/Cas12a 的检测平台(称为 CasGDP),该平台结合了 CRISPR/Cas12a 和多重重组酶聚合酶扩增(RPA),用于快速评估 GD。CasGDP 对鉴定推定的靶基因(如 、 、和 )具有高度特异性。通过使用荧光作为读出信号,该方法分别实现了对未扩增和扩增靶质粒的检测限为 0.1 nM 和 1 aM。此外,成功建立了人类 基因()的体外 GD 细胞模型。结果表明, 基因转染促进了 蛋白的表达。此外,通过 CasGDP 以荧光和侧向流动装置(LFD)为读出信号,在 40 分钟内可以有效地测量人血清中痕量的转基因。最后,我们设计了一个多路复用微流控装置,并通过嵌入装置中的 LFD 同时检测三种转基因。据我们所知,这是首次将基于 CRISPR 的系统与多重 RPA 结合用于 GD 检测的工作。我们预计 CasGDP 将广泛用作 GD 评估的快速、敏感和强大工具。

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