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遗传图谱显示,[具体物种]中的该基因编码一种假定的转氨酶。

Genetic mapping revealed that the gene in encodes a putative aminotransferase.

作者信息

Yi Shieun, Lee Do-Gyeong, Back Seungki, Hong Ju-Pyo, Jang Siyoung, Han Koeun, Kang Byoung-Cheorl

机构信息

Department of Agriculture, Forestry, and Bioresources, Research Institute of Agriculture and Life Science, Plant Genomics and Breeding Institute, College of Agriculture and Life Science, Seoul National University, Seoul, South Korea.

出版信息

Front Plant Sci. 2022 Nov 1;13:1039393. doi: 10.3389/fpls.2022.1039393. eCollection 2022.

Abstract

Several genes regulating capsaicinoid biosynthesis including (also known as ), , , and have been studied. However, the gene encoded by in the non-pungent is unknown. This study aimed to identify the gene by genetic mapping using interspecific ( × ) and intraspecific ( × ) populations. QTL mapping using the interspecific F population revealed two major QTLs on chromosomes 3 and 9. Two bin markers within the QTL regions on two chromosomes were highly correlated with the capsaicinoid content in the interspecific population. The major QTL, on chromosome 3, contained the gene, indicating that the non-pungency of may be attributed to a mutation in the gene. Sequence analysis revealed a 7 bp nucleotide insertion in the 8 exon of of the non-pungent . This mutation resulted in the generation of an early stop codon, resulting in a truncated mutant lacking the PLP binding site, which is critical for pAMT enzymatic activity. This insertion co-segregated with the pungency phenotype in the intraspecific F population. We named this novel allele . Taken together, these data indicate that the non-pungency of is due to the non-functional allele, and encodes the gene.

摘要

已经对几个调控辣椒素生物合成的基因进行了研究,包括(也称为)、、、和。然而,非辛辣品种中由编码的基因尚不清楚。本研究旨在通过利用种间(×)和种内(×)群体进行遗传定位来鉴定基因。使用种间F群体进行QTL定位,在第3号和第9号染色体上发现了两个主要QTL。两个染色体上QTL区域内的两个bin标记与种间群体中的辣椒素含量高度相关。位于第3号染色体上的主要QTL,包含基因,这表明的非辛辣性可能归因于基因的突变。序列分析显示,非辛辣品种的基因第8外显子中有一个7 bp的核苷酸插入。这种突变导致产生一个早期终止密码子,从而产生一个缺乏对pAMT酶活性至关重要的PLP结合位点的截短突变体。这种插入在种内F群体中与辛辣性表型共分离。我们将这个新的基因等位基因命名为。综上所述,这些数据表明的非辛辣性是由于无功能的等位基因所致,并且编码基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/694b/9664168/91c4c688a52b/fpls-13-1039393-g001.jpg

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