Department of Biochemistry and Structural Biology, UT Health San Antonio, San Antonio, TX, 78229, USA.
Nat Commun. 2022 Nov 19;13(1):7104. doi: 10.1038/s41467-022-34920-3.
TRIM5α is an E3 ubiquitin ligase of the TRIM family that binds to the capsids of primate immunodeficiency viruses and blocks viral replication after cell entry. Here we investigate how synthesis of K63-linked polyubiquitin is upregulated by transient proximity of three RING domains in honeycomb-like assemblies formed by TRIM5α on the surface of the retroviral capsid. Proximity of three RINGs creates an asymmetric arrangement, in which two RINGs form a catalytic dimer that activates E2-ubiquitin conjugates and the disordered N-terminus of the third RING acts as the substrate for N-terminal autoubiquitylation. RING dimerization is required for activation of the E2s that contribute to the antiviral function of TRIM5α, UBE2W and heterodimeric UBE2N/V2, whereas the proximity of the third RING enhances the rate of each of the two distinct steps in the autoubiquitylation process: the initial N-terminal monoubiquitylation (priming) of TRIM5α by UBE2W and the subsequent extension of the K63-linked polyubiquitin chain by UBE2N/V2. The mechanism we describe explains how recognition of infection-associated epitope patterns by TRIM proteins initiates polyubiquitin-mediated downstream events in innate immunity.
TRIM5α 是一种属于 TRIM 家族的 E3 泛素连接酶,可与灵长类免疫缺陷病毒的衣壳结合,并在细胞进入后阻断病毒复制。在这里,我们研究了在逆转录病毒衣壳表面形成的蜂窝状三聚体中,三个 RING 结构域的短暂接近如何上调 K63 连接的多泛素的合成。三个 RING 的接近形成了一种不对称的排列,其中两个 RING 形成一个催化二聚体,激活 E2-泛素缀合物,而第三个 RING 的无序 N 端作为 N 端自泛素化的底物。RING 二聚化对于激活有助于 TRIM5α、UBE2W 和异源二聚体 UBE2N/V2 的抗病毒功能的 E2 是必需的,而第三个 RING 的接近增强了自泛素化过程中两个不同步骤的速率:UBE2W 对 TRIM5α 的初始 N 端单泛素化(引发)和随后由 UBE2N/V2 延伸的 K63 连接的多泛素链。我们描述的机制解释了 TRIM 蛋白如何识别感染相关表位模式,从而引发先天免疫中多泛素介导的下游事件。