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一种基于SEIR的群体优化器辅助的新发传染病模拟与预测模型。

A swarm-optimizer-assisted simulation and prediction model for emerging infectious diseases based on SEIR.

作者信息

Shi Xuan-Li, Wei Feng-Feng, Chen Wei-Neng

机构信息

School of Computer Science and Engineering, South China University of Technology, Guangzhou, 510006 China.

出版信息

Complex Intell Systems. 2023;9(2):2189-2204. doi: 10.1007/s40747-022-00908-1. Epub 2022 Nov 16.

Abstract

Mechanism-driven models based on transmission dynamics and statistic models driven by public health data are two main methods for simulating and predicting emerging infectious diseases. In this paper, we intend to combine these two methods to develop a more comprehensive model for the simulation and prediction of emerging infectious diseases. First, we combine a standard epidemic dynamic, the susceptible-exposed-infected-recovered (SEIR) model with population migration. This model can provide a biological spread process for emerging infectious diseases. Second, to determine suitable parameters for the model, we propose a data-driven approach, in which the public health data and population migration data are assembled. Moreover, an objective function is defined to minimize the error based on these data. Third, based on the proposed model, we further develop a swarm-optimizer-assisted simulation and prediction method, which contains two modules. In the first module, we use a level-based learning swarm optimizer to optimize the parameters required in the epidemic mechanism. In the second module, the optimized parameters are used to predicate the spread of emerging infectious diseases. Finally, various experiments are conducted to validate the effectiveness of the proposed model and method.

摘要

基于传播动力学的机制驱动模型和由公共卫生数据驱动的统计模型是模拟和预测新发传染病的两种主要方法。在本文中,我们打算将这两种方法结合起来,开发一个更全面的新发传染病模拟和预测模型。首先,我们将标准的疫情动态模型——易感-暴露-感染-康复(SEIR)模型与人口迁移相结合。该模型可以为新发传染病提供一个生物传播过程。其次,为了确定模型的合适参数,我们提出一种数据驱动方法,其中汇集了公共卫生数据和人口迁移数据。此外,定义了一个目标函数以基于这些数据最小化误差。第三,基于所提出的模型,我们进一步开发了一种群体优化器辅助的模拟和预测方法,该方法包含两个模块。在第一个模块中,我们使用基于水平学习的群体优化器来优化疫情机制所需的参数。在第二个模块中,使用优化后的参数来预测新发传染病的传播。最后,进行了各种实验以验证所提出的模型和方法的有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72b9/9667448/369865eff7fc/40747_2022_908_Fig1_HTML.jpg

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