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中国动物源性食品中肠杆菌科的耐药性及其质粒和染色体定位。

Chromosomally and Plasmid-Located in Salmonella from Animals and Food Products in China.

机构信息

Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou Universitygrid.268415.c, Yangzhou, China.

Key Laboratory of Prevention and Control of Biological Hazard Factors (Animal Origin) for Agrifood Safety and Quality, Ministry of Agriculture of China, Yangzhou Universitygrid.268415.c, Yangzhou, China.

出版信息

Microbiol Spectr. 2022 Dec 21;10(6):e0277322. doi: 10.1128/spectrum.02773-22. Epub 2022 Nov 21.

Abstract

This study aimed to investigate the prevalence and genomic characteristics of the colistin resistance gene in Salmonella enterica in China. In total, 445 S. enterica isolates from animals and food products were screened through PCR and sequencing for the presence of . The genes were detected in nine Salmonella strains (2.02%), with complete in S. enterica serovar Indiana ( = 1) and an Typhimurium monophasic variant ( 4,[5],12:i:-;  = 1), in S. enterica serovar London ( = 1), and an incomplete in . Indiana ( = 6). They exhibited MIC values of 0.25 to 8 mg/L to colistin and showed resistance to multiple antimicrobial agents. Whole-genome sequencing was performed on -positive Salmonella strains using Illumina HiSeq or PacBio single-molecule real-time sequencing. The complete gene was located on conjugative IncN1-IncHI2 plasmid and IncX4 plasmid, respectively, with high similarity to other -bearing plasmids belonging to the same incompatibility type. Together with an additional 13 antimicrobial resistance genes, the incomplete was embedded in an 81,442-bp multiresistance region on the chromosome in . Indiana YZ20MCS6. The Δ segment and a set of tellurite resistance determinants () in six . Indiana strains were similar to other IncHI2 plasmid backbones. The gene was located on an untyped plasmid pYULZMPS10. Although low prevalence of was observed in Salmonella, continuous surveillance of this gene in Salmonella is required. Plasmids play an important role in transmission, and , although incomplete, can be captured by chromosomes with the help of mobile elements. Colistin is a last-resort antibiotic for severe infections caused by multidrug-resistant (MDR) Gram-negative pathogens. Colistin resistance genes , particularly , have been found in around the world, mainly in Escherichia coli and Salmonella. Salmonella enterica is a major foodborne pathogen, with MDR Salmonella being considered a "Serious Threat Level pathogen" by the Centers for Disease Control and Prevention. Therefore, the prevalence of in Salmonella strains must be monitored. In this study, a low prevalence (2.02%) was observed in Salmonella strains from animals and food products, with plasmid-borne in S. enterica serovar Indiana and an Typhimurium monophasic variant ( 4,[5],12:i:-) and chromosomally located in Indiana. The gene was first identified in S. enterica serovar London associated with an untyped plasmid. Although this study reports a low prevalence in Salmonella, the transmission ability of -positive Salmonella strains to humans via the food chain is a public health concern.

摘要

本研究旨在调查中国肠沙门氏菌中粘菌素耐药基因的流行情况和基因组特征。通过 PCR 和测序,从动物和食品源分离的 445 株肠沙门氏菌中筛选携带 基因的菌株。在 9 株沙门氏菌(2.02%)中检测到 基因,其中肠炎沙门氏菌血清型印第安纳( = 1)和 1 型 单相位变体( 4,[5],12:i:-; = 1)中存在完整的 ,伦敦沙门氏菌血清型( = 1)中存在 ,而 印第安纳( = 6)中存在不完全的 。它们对粘菌素的 MIC 值为 0.25 至 8 毫克/升,表现出对多种抗菌药物的耐药性。使用 Illumina HiSeq 或 PacBio 单分子实时测序对 阳性沙门氏菌进行全基因组测序。完整的 基因位于可移动的 IncN1-IncHI2 质粒和 IncX4 质粒上,与其他属于同一不相容类型的携带 基因的质粒具有高度相似性。在 印第安纳 YZ20MCS6 中,不完全的 与另外 13 种抗菌药物耐药基因一起位于染色体上的一个 81442bp 的多耐药区。在 6 株 印第安纳沙门氏菌中,Δ 片段和一组碲酸盐抗性决定簇()与其他 IncHI2 质粒骨架相似。 基因位于未分型质粒 pYULZMPS10 上。尽管在沙门氏菌中观察到 的低流行率,但仍需要对该基因进行持续监测。质粒在 基因的传播中起着重要作用,而尽管不完全,但在移动元件的帮助下可以被染色体捕获。粘菌素是治疗由多重耐药(MDR)革兰氏阴性病原体引起的严重感染的最后手段抗生素。 基因,特别是 ,已在世界各地的 中发现,主要存在于大肠杆菌和沙门氏菌中。肠沙门氏菌是一种主要的食源性病原体,疾病预防控制中心将耐药性肠沙门氏菌视为“严重威胁级别病原体”。因此,必须监测沙门氏菌菌株中 基因的流行情况。在本研究中,从动物和食品源分离的沙门氏菌中观察到 的低流行率(2.02%),肠炎沙门氏菌血清型印第安纳和 1 型 单相位变体( 4,[5],12:i:-)中存在可移动的质粒结合 ,而 印第安纳中存在染色体定位的 。首次在与未分型质粒相关的伦敦沙门氏菌血清型中发现 基因。尽管本研究报告了沙门氏菌中 的低流行率,但通过食物链传播给人类的 阳性沙门氏菌的能力是一个公共卫生问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d12/9769515/d026d20a3572/spectrum.02773-22-f001.jpg

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