IBG-1: Biotechnology, Institute of Bio- and Geosciences, Forschungszentrum Jülichgrid.8385.6, Jülich, Germany.
IBI-7: Structural Biochemistry, Institute of Biological Information Processing, Forschungszentrum Jülichgrid.8385.6, Jülich, Germany.
Microbiol Spectr. 2022 Dec 21;10(6):e0267722. doi: 10.1128/spectrum.02677-22. Epub 2022 Nov 29.
In Corynebacterium glutamicum the protein kinase PknG phosphorylates OdhI and thereby abolishes the inhibition of 2-oxoglutarate dehydrogenase activity by unphosphorylated OdhI. Our previous studies suggested that PknG activity is controlled by the periplasmic binding protein GlnH and the transmembrane protein GlnX, because Δ and Δ mutants showed a growth defect on glutamine similar to that of a Δ mutant. We have now confirmed the involvement of GlnH and GlnX in the control of OdhI phosphorylation by analyzing the OdhI phosphorylation status and glutamate secretion in Δ and Δ mutants and by characterizing Δ suppressor mutants. We provide evidence for GlnH being a lipoprotein and show by isothermal titration calorimetry that it binds l-aspartate and l-glutamate with moderate to low affinity, but not l-glutamine, l-asparagine, or 2-oxoglutarate. Based on a structural comparison with GlnH of Mycobacterium tuberculosis, two residues critical for the binding affinity were identified and verified. The predicted GlnX topology with four transmembrane segments and two periplasmic domains was confirmed by PhoA and LacZ fusions. A structural model of GlnX suggested that, with the exception of a poorly ordered N-terminal region, the entire protein is composed of α-helices and small loops or linkers, and it revealed similarities to other bacterial transmembrane receptors. Our results suggest that the GlnH-GlnX-PknG-OdhI-OdhA signal transduction cascade serves to adapt the flux of 2-oxoglutarate between ammonium assimilation via glutamate dehydrogenase and energy generation via the tricarboxylic acid (TCA) cycle to the availability of the amino group donors l-glutamate and l-aspartate in the environment. comprise a large number of species playing important roles in biotechnology and medicine, such as Corynebacterium glutamicum, the major industrial amino acid producer, and Mycobacterium tuberculosis, the pathogen causing tuberculosis. Many actinobacteria use a signal transduction process in which the phosphorylation status of OdhI (corynebacteria) or GarA (mycobacteria) regulates the carbon flux at the 2-oxoglutarate node. Inhibition of 2-oxoglutarate dehydrogenase by unphosphorylated OdhI shifts the flux of 2-oxoglutarate from the TCA cycle toward glutamate formation and, thus, ammonium assimilation. Phosphorylation of OdhI/GarA is catalyzed by the protein kinase PknG, whose activity was proposed to be controlled by the periplasmic binding protein GlnH and the transmembrane protein GlnX. In this study, we combined genetic, biochemical, and structural modeling approaches to characterize GlnH and GlnX of C. glutamicum and confirm their roles in the GlnH-GlnX-PknG-OdhI-OdhA signal transduction cascade. These findings are relevant also to other employing a similar control process.
在谷氨酸棒杆菌中,蛋白激酶 PknG 使 OdhI 磷酸化,从而消除未磷酸化的 OdhI 对 2-氧戊二酸脱氢酶活性的抑制。我们之前的研究表明,PknG 活性受周质结合蛋白 GlnH 和跨膜蛋白 GlnX 控制,因为Δ和Δ突变体在谷氨酰胺上的生长缺陷与Δ突变体相似。我们通过分析Δ和Δ突变体的 OdhI 磷酸化状态和谷氨酸分泌,并通过表征Δ抑制突变体,现在已经证实了 GlnH 和 GlnX 参与了 OdhI 磷酸化的控制。我们提供了 GlnH 是脂蛋白的证据,并通过等温热滴定法表明它以中等至低亲和力结合 l-天冬氨酸和 l-谷氨酸,但不结合 l-谷氨酰胺、l-天冬酰胺或 2-氧戊二酸。基于与结核分枝杆菌的 GlnH 的结构比较,确定并验证了两个对结合亲和力至关重要的残基。通过 PhoA 和 LacZ 融合物证实了预测的 GlnX 拓扑结构,具有四个跨膜片段和两个周质结构域。GlnX 的结构模型表明,除了一个顺序较差的 N 端区域外,整个蛋白质由α-螺旋和小环或连接子组成,并且它与其他细菌跨膜受体具有相似性。我们的结果表明,GlnH-GlnX-PknG-OdhI-OdhA 信号转导级联反应有助于使 2-氧戊二酸的通量适应环境中 l-谷氨酸和 l-天冬氨酸作为氨基供体的可用性,该通量在铵同化通过谷氨酸脱氢酶和通过三羧酸 (TCA) 循环进行能量生成之间进行。谷氨酸棒杆菌包括许多在生物技术和医学中发挥重要作用的物种,例如谷氨酸棒杆菌,这是主要的工业氨基酸生产菌,以及结核分枝杆菌,这是引起结核病的病原体。许多放线菌使用一种信号转导过程,其中 OdhI(棒杆菌)或 GarA(分枝杆菌)的磷酸化状态调节 2-氧戊二酸节点处的碳通量。未磷酸化的 OdhI 抑制 2-氧戊二酸脱氢酶将 2-氧戊二酸的通量从 TCA 循环转移到谷氨酸的形成,从而促进铵同化。磷酸化的 OdhI/GarA 由蛋白激酶 PknG 催化,其活性被提议由周质结合蛋白 GlnH 和跨膜蛋白 GlnX 控制。在这项研究中,我们结合了遗传、生化和结构建模方法来表征谷氨酸棒杆菌的 GlnH 和 GlnX,并证实了它们在 GlnH-GlnX-PknG-OdhI-OdhA 信号转导级联中的作用。这些发现也与其他采用类似控制过程的谷氨酸棒杆菌有关。