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用于即时检测的活病原体双模可视化检测策略。

Dual-mode visual detection strategies of viable pathogens for point-of-care testing.

机构信息

Department of BioNano Technology, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, Gyeonggi-do, 13120, South Korea.

Department of BioNano Technology, Gachon University, 1342 Seongnam-daero, Sujeong-gu, Seongnam-si, Gyeonggi-do, 13120, South Korea.

出版信息

Biosens Bioelectron. 2023 Feb 1;221:114904. doi: 10.1016/j.bios.2022.114904. Epub 2022 Nov 12.

Abstract

Here, we introduce a power-free foldable poly(methyl methacrylate) (PMMA) microdevice fully integrating DNA extraction, amplification, and visual detection, realized in novel dual modes - colorimetric and aggregate formation - using 4-Aminoantipyrine (4-AP) for monitoring pathogens. The microdevice contains two parts: reaction and detection zones. A sealing film was utilized to connect the two zones and make the device foldable. The FTA card was deposited in the reaction zone for DNA extraction, followed by loop-mediated isothermal amplification (LAMP) at 65 °C for 45 min. When the detection zone is folded toward the reaction zone, paper discs modified with 4-AP placed in the detection zone are delivered to the reaction zone. Specifically, in the presence of LAMP amplicons, 4-AP is oxidized into antipyrine red or generates aggregates by interacting with copper sulfate, forming copper hybrid nanostructure (Cu-hNs). In the absence of LAMP amplicons, 4-AP is not oxidized and maintains yellow color or fails to form aggregates. Furthermore, we introduced the ethidium homodimer-1 (EthD-1) to identify viable bacteria. EthD-1 penetrated the compromised membranes of nonviable cells and prevented further DNA amplification by intercalating with the DNA. In this way, only samples containing viable cells displayed color change or formed aggregates upon reaction with 4-AP. Using this method, SARS-CoV-2 RNA and Enterococcus faecium were identified by naked eye, with the limit of detection of 10 copies/μL and 10 CFU/mL, respectively, within 60 min. The introduced microdevice can be used for rapidly monitoring viable pathogens and controlling outbreaks of infectious disease in resource-limited settings.

摘要

在这里,我们介绍了一种无需外部能源即可折叠的聚甲基丙烯酸甲酯(PMMA)微器件,该器件完全集成了 DNA 提取、扩增和可视化检测功能,可通过 4-氨基安替比林(4-AP)以新的双模式(比色法和聚集形成)实现,用于监测病原体。该微器件包含两个部分:反应区和检测区。使用密封膜将两个区域连接起来,使器件能够折叠。将 FTA 卡沉积在反应区中用于 DNA 提取,然后在 65°C 下进行环介导等温扩增(LAMP)45 分钟。当检测区折叠到反应区时,放置在检测区中的修饰有 4-AP 的纸盘被输送到反应区。具体来说,在存在 LAMP 扩增子的情况下,4-AP 被氧化成安替比林红或与硫酸铜相互作用生成聚集体,形成铜杂化纳米结构(Cu-hNs)。在不存在 LAMP 扩增子的情况下,4-AP 不会被氧化,保持黄色或无法形成聚集体。此外,我们引入了吖啶橙-1(EthD-1)来识别活细菌。EthD-1 穿透非存活细胞的受损膜,并通过与 DNA 插入结合来阻止进一步的 DNA 扩增。通过这种方式,只有含有活细胞的样品在与 4-AP 反应时才会显示颜色变化或形成聚集体。使用这种方法,可以通过肉眼识别 SARS-CoV-2 RNA 和屎肠球菌,检测限分别为 10 拷贝/μL 和 10 CFU/mL,整个过程在 60 分钟内完成。引入的微器件可用于快速监测活病原体,并在资源有限的环境中控制传染病的爆发。

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