Department of BioNano Technology , Gachon University , 1342 Seongnam-daero , Sujeong-gu, Seongnam-si , Gyeonggi-do 13120 , Korea.
Anal Chem. 2019 Sep 3;91(17):11013-11022. doi: 10.1021/acs.analchem.9b01263. Epub 2019 Jul 18.
We report herein the colorimetric identification of live cells based on a nucleic acid amplification testing (NAAT) methodology using an all-in-one origami paper microdevice integrated with DNA purification, loop-mediated isothermal amplification (LAMP), and on-site colorimetric detection. First, origami paper was partially embossed to create microchannel networks and chambers. Subsequently, hydrophobic polydimethylsiloxane prepolymer was coated onto the embossed paper to stabilize the structures on paper and provide fluid barriers. The paper microdevice was composed of splitting, purification, wicking, reaction, and dye pads folded alternatively to accomplish sensitive and specific NAAT. For the viability assay, propidium monoazide (PMA) was employed to penetrate dead cells and form covalent bonds with necrotic cell DNA; thus, amplification can be solely performed with DNA obtained from live bacterial cells. Purification functionality was implemented into the microdevice using chitosan to electrostatically capture DNA. Herein, methylene blue, which is typically used for electrochemical detection, is introduced for the first time for colorimetric detection of LAMP amplicons. This origami paper microdevice was successfully applied to determine the viability of foodborne pathogens, such as O157:H7 and spp., in which amplification was performed for 30 min followed by the execution of the colorimetric method for 10 min, thereby demonstrating tremendous potential for multiplexing and versatility for point-of-care applications. The introduced origami paper microdevice could be an attractive substitute as an instantaneous and convenient screening tool for the identification of viable pathogens in the control and monitoring of foodborne outbreaks in low-resource environments.
我们在此报告了一种基于核酸扩增测试(NAAT)方法的比色法鉴定活细胞的方法,该方法使用了一种集成了 DNA 纯化、环介导等温扩增(LAMP)和现场比色检测的一体式折纸纸微器件。首先,对折纸进行部分压花以创建微通道网络和腔室。随后,将疏水性聚二甲基硅氧烷预聚物涂覆在压花纸上,以稳定纸结构并提供流体屏障。该纸微器件由分裂、纯化、吸水、反应和染色垫交替折叠而成,以完成灵敏和特异的 NAAT。对于生存能力测定,使用吖啶橙单叠氮化物(PMA)穿透死细胞并与坏死细胞 DNA 形成共价键;因此,仅可使用来自活细菌细胞的 DNA 进行扩增。使用壳聚糖将纯化功能集成到微器件中,以静电捕获 DNA。在此,首次引入了通常用于电化学检测的亚甲基蓝用于 LAMP 扩增子的比色检测。该折纸纸微器件成功应用于确定食源性病原体(如 O157:H7 和 spp.)的生存能力,其中扩增进行 30 分钟,然后执行比色法 10 分钟,从而展示了用于多点应用的巨大潜力。所介绍的折纸纸微器件可以作为一种有吸引力的替代品,作为即时和方便的筛选工具,用于在低资源环境中控制和监测食源性爆发时鉴定有活力的病原体。