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多个人为压力源对大型溞转录反应的影响:一个中宇宙野外实验。

Impacts of multiple anthropogenic stressors on the transcriptional response of Gammarus fossarum in a mesocosm field experiment.

机构信息

Leibniz Institute for the Analysis of Biodiversity Change, Zoological Research Museum A. Koenig, Adenauerallee 127, 53113, Bonn, Germany.

Aquatic Ecosystem Research, University of Duisburg-Essen, Universitaetsstrasse 5, 45141, Essen, Germany.

出版信息

BMC Genomics. 2022 Dec 8;23(1):816. doi: 10.1186/s12864-022-09050-1.

Abstract

BACKGROUND

Freshwaters are exposed to multiple anthropogenic stressors, leading to habitat degradation and biodiversity decline. In particular, agricultural stressors are known to result in decreased abundances and community shifts towards more tolerant taxa. However, the combined effects of stressors are difficult to predict as they can interact in complex ways, leading to enhanced (synergistic) or decreased (antagonistic) response patterns. Furthermore, stress responses may remain undetected if only the abundance changes in ecological experiments are considered, as organisms may have physiological protective pathways to counteract stressor effects. Therefore, we here used transcriptome-wide sequencing data to quantify single and combined effects of elevated fine sediment deposition, increased salinity and reduced flow velocity on the gene expression of the amphipod Gammarus fossarum in a mesocosm field experiment.

RESULTS

Stressor exposure resulted in a strong transcriptional suppression of genes involved in metabolic and energy consuming cellular processes, indicating that G. fossarum responds to stressor exposure by directing energy to vitally essential processes. Treatments involving increased salinity induced by far the strongest transcriptional response, contrasting the observed abundance patterns where no effect was detected. Specifically, increased salinity induced the expression of detoxification enzymes and ion transporter genes, which control the membrane permeability of sodium, potassium or chloride. Stressor interactions at the physiological level were mainly antagonistic, such as the combined effect of increased fine sediment and reduced flow velocity. The compensation of the fine sediment induced effect by reduced flow velocity is in line with observations based on specimen abundance data.

CONCLUSIONS

Our findings show that gene expression data provide new mechanistic insights in responses of freshwater organisms to multiple anthropogenic stressors. The assessment of stressor effects at the transcriptomic level and its integration with stressor effects at the level of specimen abundances significantly contribute to our understanding of multiple stressor effects in freshwater ecosystems.

摘要

背景

淡水受到多种人为胁迫的影响,导致生境退化和生物多样性减少。特别是农业胁迫被认为会导致丰度下降,群落向更耐受的类群转移。然而,由于胁迫之间可能以复杂的方式相互作用,因此难以预测它们的综合效应,这可能导致增强(协同)或减少(拮抗)的响应模式。此外,如果仅考虑生态实验中生物丰度的变化,那么胁迫反应可能会被忽略,因为生物体可能有生理保护途径来抵消胁迫效应。因此,我们在这里使用转录组测序数据来量化在一个中观现场实验中,升高的细沉积物沉积、增加的盐度和降低的流速对广斧螳 Gammarus fossarum 基因表达的单一和综合影响。

结果

胁迫暴露导致参与代谢和能量消耗细胞过程的基因强烈转录抑制,表明 G. fossarum 通过将能量导向至关重要的过程来应对胁迫暴露。涉及由远增加的盐度引起的胁迫处理诱导了最强的转录反应,与观察到的丰度模式形成对比,在该模式中未检测到任何影响。具体而言,增加的盐度诱导了解毒酶和离子转运基因的表达,这些基因控制着钠、钾或氯的膜通透性。在生理水平上,胁迫相互作用主要是拮抗的,例如增加的细沉积物和降低的流速的组合效应。降低流速对细沉积物诱导效应的补偿与基于标本丰度数据的观察结果一致。

结论

我们的研究结果表明,基因表达数据为淡水生物对多种人为胁迫的反应提供了新的机制见解。在转录组水平上评估胁迫效应及其与标本丰度水平上的胁迫效应的整合,极大地促进了我们对淡水生态系统中多种胁迫效应的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a14/9733165/de611df715d1/12864_2022_9050_Fig1_HTML.jpg

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