Department of Pathology, Stanford University, Stanford, CA 94305, USA; Center for Personal Dynamic Regulomes, Stanford University, Stanford, CA 94305, USA; Gladstone-UCSF Institute of Genomic Immunology, San Francisco, CA 94158, USA.
Department of Pathology, Stanford University, Stanford, CA 94305, USA; Department of Computer Science, Stanford University, Stanford, CA 94305, USA; Gladstone-UCSF Institute of Genomic Immunology, San Francisco, CA 94158, USA.
Mol Cell. 2023 Jan 5;83(1):121-138.e7. doi: 10.1016/j.molcel.2022.11.017. Epub 2022 Dec 14.
Cell cycle (CC) facilitates cell division via robust, cyclical gene expression. Protective immunity requires the expansion of pathogen-responsive cell types, but whether CC confers unique gene expression programs that direct the subsequent immunological response remains unclear. Here, we demonstrate that single macrophages (MFs) adopt different plasticity states in CC, which leads to heterogeneous cytokine-induced polarization, priming, and repolarization programs. Specifically, MF plasticity to interferon gamma (IFNG) is substantially reduced during S-G2/M, whereas interleukin 4 (IL-4) induces S-G2/M-biased gene expression, mediated by CC-biased enhancers. Additionally, IL-4 polarization shifts the CC-phase distribution of MFs toward the G2/M phase, providing a subpopulation-specific mechanism for IL-4-induced, dampened IFNG responsiveness. Finally, we demonstrate CC-dependent MF responses in murine and human disease settings in vivo, including Th2-driven airway inflammation and pulmonary fibrosis, where MFs express an S-G2/M-biased tissue remodeling gene program. Therefore, MF inflammatory and regenerative responses are gated by CC in a cyclical, phase-dependent manner.
细胞周期(CC)通过强大的周期性基因表达促进细胞分裂。保护性免疫需要病原体反应性细胞类型的扩增,但 CC 是否赋予指导随后免疫反应的独特基因表达程序仍不清楚。在这里,我们证明单核细胞(MFs)在 CC 中采用不同的可塑性状态,这导致细胞因子诱导的极化、启动和重极化程序存在异质性。具体而言,MF 对干扰素 γ(IFNG)的可塑性在 S-G2/M 期间大大降低,而白细胞介素 4(IL-4)通过 CC 偏向的增强子诱导 S-G2/M 偏向的基因表达。此外,IL-4 极化将 MFs 的 CC 相分布推向 G2/M 期,为 IL-4 诱导的、IFNG 反应性降低提供了特定于亚群的机制。最后,我们在体内的小鼠和人类疾病模型中证明了 CC 依赖性 MF 反应,包括 Th2 驱动的气道炎症和肺纤维化,其中 MFs 表达 S-G2/M 偏向的组织重塑基因程序。因此,MF 的炎症和再生反应以周期性、相位依赖的方式由 CC 控制。
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