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基于加权基因共表达网络分析(WGCNA)、体内和体外分析,莲子种子极性提取物通过关键信号通路实现气道平滑肌舒张的综合机制

Integrated Mechanisms of Polarity-Based Extracts of L. Seed Kernels for Airway Smooth Muscle Relaxation via Key Signaling Pathways Based on WGCNA, In Vivo, and In Vitro Analyses.

作者信息

Wahid Muqeet, Saqib Fatima, Ali Anam, Alshammari Abdulrahman, Alharbi Metab, Rauf Abdur, Mubarak Mohammad S

机构信息

Department of Pharmacology, Faculty of Pharmacy, Bahauddin Zakariya University, Multan 60000, Pakistan.

Department of Pharmacology and Toxicology, College of Pharmacy, King Saud University, Post Box 2455, Riyadh 11451, Saudi Arabia.

出版信息

Pharmaceuticals (Basel). 2022 Dec 7;15(12):1522. doi: 10.3390/ph15121522.

Abstract

The present study aimed to determine the mechanisms responsible for calcium-mediated smooth muscle contractions in seeds. The phytochemicals of were identified and quantified with the aid of Liquid Chromatography Electrospray Ionization Tandem Mass Spectrometric (LC/ESI-MS/MS) and high-performance liquid chromatography (HPLC), and then tested in-vitro and in vivo to confirm involvement in smooth muscle relaxation. Allergic asthma gene datasets were acquired from the NCBI gene expression omnibus (GEO) and differentially expressed gene (DEG) analysis, weighted gene co-expression network analysis (WGCNA), and functional enrichment analysis were conducted. Additionally, molecular docking of key genes was carried out. Kaempferol, rutin, and quercetin are identified as phytochemical constituents of seeds. Results indicated that seeds exhibit a dose-dependent relaxant effect for potassium chloride (80 mM)- induced spastic contraction and calcium antagonistic response in calcium dose-response curves. The functional enrichment of WGCNA and DEG asthma-associated pathogenic genes showed cytokine-mediated pathways and inflammatory responses. Furthermore, CACNA1A, IL2RB, and NOS2 were identified as key genes with greater binding affinity with rutin, quercitrin, and kaempferol in molecular docking. These results show that the bronchodilator and antidiarrheal effects of were produced by altering the regulatory genes of calcium-mediated smooth muscle contraction.

摘要

本研究旨在确定种子中钙介导的平滑肌收缩的机制。借助液相色谱电喷雾电离串联质谱(LC/ESI-MS/MS)和高效液相色谱(HPLC)对[具体物质]的植物化学成分进行了鉴定和定量,然后在体外和体内进行测试,以确认其参与平滑肌舒张。从NCBI基因表达综合数据库(GEO)获取过敏性哮喘基因数据集,并进行差异表达基因(DEG)分析、加权基因共表达网络分析(WGCNA)和功能富集分析。此外,还对关键基因进行了分子对接。山奈酚、芦丁和槲皮素被鉴定为[具体物质]种子的植物化学成分。结果表明,[具体物质]种子对氯化钾(80 mM)诱导的痉挛性收缩呈现剂量依赖性舒张作用,在钙剂量反应曲线中呈现钙拮抗反应。WGCNA和DEG哮喘相关致病基因的功能富集显示细胞因子介导的途径和炎症反应。此外,在分子对接中,CACNA1A、IL2RB和NOS2被鉴定为与芦丁、槲皮苷和山奈酚具有更高结合亲和力的关键基因。这些结果表明,[具体物质]的支气管扩张和止泻作用是通过改变钙介导的平滑肌收缩的调节基因产生的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33df/9784679/bea7536aac68/pharmaceuticals-15-01522-g001.jpg

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