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蔓越莓种子通过 WGCNA 及在体、离体研究调控钙信号通路相关基因网络治疗胃肠道肌肉痉挛的作用机制研究。

Mechanistic insights of Cucumis melo L. seeds for gastrointestinal muscle spasms through calcium signaling pathway-related gene regulation networks in WGCNA and in vitro, in vivo studies.

机构信息

Department of Pharmacology, Faculty of Pharmacy, Bahauddin Zakariya University, Multan, 60000, Pakistan.

Institute of Food Science and Nutrition, Bahauddin Zakariya University, Multan, 60000, Pakistan.

出版信息

Comput Biol Med. 2023 Mar;155:106596. doi: 10.1016/j.compbiomed.2023.106596. Epub 2023 Feb 2.

Abstract

BACKGROUND

In addition to the nutritional benefits of Cucumis melo L., herbalists in Pakistan and India employ seeds to treat various ailments. This study aimed to determine the regulatory role of C. melo seeds in calcium-mediated smooth muscle contraction.

METHODS

We identified and quantified the phytochemicals of C. melo with LC ESI-MS/MS and HPLC, then conducted in vitro and in vivo tests to confirm the involvement in smooth muscle relaxation. Then, diarrhea-predominant irritable bowel syndrome gene datasets from NCBI GEO were acquired, DEGs and WGCNA followed by functional enrichment analysis. Next, molecular docking of key genes was performed.

RESULTS

The quantification of C. melo seeds revealed concentrations of rutin, kaempferol, and quercetin were 702.38 μg/g, 686.29 μg/g, and 658.41 μg/g, respectively. In vitro experiments revealed that C. melo seeds had a dose-dependent relaxant effect for potassium chloride (80 mM)-induced spastic contraction and exhibited calcium antagonistic response in calcium dose-response curves. In in vivo studies, Cm.EtOH exhibited antidiarrheal, antiperistaltic, and antisecretory effects. The functional enrichment of WGCNA and DEGs IBS-associated pathogenic genes, including those involved in calcium-mediated signaling, MAPK cascade, and inflammatory responses. MAPK1 and PIK3CG were identified as key genes with greater binding affinity with rutin, quercitrin, and kaempferol in molecular docking.

CONCLUSIONS

The bronchodilator and antidiarrheal effects of C. melo were produced by altering the regulatory genes of calcium-mediated smooth contraction.

摘要

背景

除了甜瓜的营养价值外,巴基斯坦和印度的草药医生还使用其种子来治疗各种疾病。本研究旨在确定甜瓜种子在钙介导的平滑肌收缩中的调节作用。

方法

我们使用 LC ESI-MS/MS 和 HPLC 鉴定和定量了甜瓜中的植物化学物质,然后进行了体外和体内试验,以确认其对平滑肌松弛的作用。接着,从 NCBI GEO 获取了以腹泻为主的肠易激综合征基因数据集,进行 DEGs 和 WGCNA 分析,然后进行功能富集分析。接下来,对关键基因进行分子对接。

结果

对甜瓜种子的定量分析显示,芦丁、山奈酚和槲皮素的浓度分别为 702.38μg/g、686.29μg/g 和 658.41μg/g。体外实验表明,甜瓜种子对氯化钾(80mM)诱导的痉挛性收缩具有剂量依赖性的松弛作用,并在钙剂量反应曲线上表现出钙拮抗反应。在体内研究中,Cm.EtOH 表现出抗腹泻、抗蠕动和抗分泌作用。WGCNA 和 DEGs 的功能富集分析表明,与 IBS 相关的致病基因,包括参与钙介导信号、MAPK 级联和炎症反应的基因,与甜瓜种子的功能相关。MAPK1 和 PIK3CG 被鉴定为关键基因,它们在分子对接中与芦丁、槲皮苷和山奈酚具有更高的结合亲和力。

结论

甜瓜的支气管扩张和抗腹泻作用是通过改变钙介导的平滑肌收缩的调节基因产生的。

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