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在添加了来自四膜虫亚细胞组分的兔网织红细胞裂解物中,四膜虫mRNA中不寻常的纤毛虫特异性密码子能够被正确翻译。

Unusual ciliate-specific codons in Tetrahymena mRNAs are translated correctly in a rabbit reticulocyte lysate supplemented with a subcellular fraction from Tetrahymena.

作者信息

Andreasen P H, Dreisig H, Kristiansen K

机构信息

Department of Molecular Biology, Odense University, Denmark.

出版信息

Biochem J. 1987 Jun 1;244(2):331-5. doi: 10.1042/bj2440331.

DOI:10.1042/bj2440331
PMID:3663125
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1147995/
Abstract

The codon usage of Tetrahymena thermophila and other ciliates deviates from the 'universal genetic code' in that UAA and probably UAG are not translational termination signals but code for glutamine. Therefore, translation in vitro of mRNA from Tetrahymena in a reticulocyte lysate is prematurely terminated if a UAA or UAG triplet is present in the reading frame of the mRNA. We show that the addition of a subcellular fraction from Tetrahymena thermophila enables a rabbit reticulocyte lysate to translate Tetrahymena mRNAs into full-sized proteins. The activity of the subcellular fraction is shown to depend on the combined function of a protein component(s) and a tRNA(s). The subcellular fraction is easily prepared and its usefulness for the identification of isolated mRNAs from Tetrahymena by their translation products in vitro is demonstrated.

摘要

嗜热四膜虫和其他纤毛虫的密码子使用情况与“通用遗传密码”不同,因为UAA以及可能的UAG并非翻译终止信号,而是编码谷氨酰胺。因此,如果mRNA的阅读框中存在UAA或UAG三联体,嗜热四膜虫mRNA在网织红细胞裂解物中的体外翻译会过早终止。我们发现,添加嗜热四膜虫的亚细胞组分能使兔网织红细胞裂解物将嗜热四膜虫mRNA翻译成全长蛋白质。结果表明,该亚细胞组分的活性取决于一种或多种蛋白质成分与一种或多种tRNA的联合功能。这种亚细胞组分易于制备,并且通过体外翻译产物证明了其对于鉴定从嗜热四膜虫分离的mRNA的有用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/6583c210214f/biochemj00254-0088-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/e873b49d83cf/biochemj00254-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/3beee20a3407/biochemj00254-0087-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/6583c210214f/biochemj00254-0088-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/e873b49d83cf/biochemj00254-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/3beee20a3407/biochemj00254-0087-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f32/1147995/6583c210214f/biochemj00254-0088-a.jpg

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1
Unusual ciliate-specific codons in Tetrahymena mRNAs are translated correctly in a rabbit reticulocyte lysate supplemented with a subcellular fraction from Tetrahymena.在添加了来自四膜虫亚细胞组分的兔网织红细胞裂解物中,四膜虫mRNA中不寻常的纤毛虫特异性密码子能够被正确翻译。
Biochem J. 1987 Jun 1;244(2):331-5. doi: 10.1042/bj2440331.
2
Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs.纤毛生物进化中的戏剧性事件:由于两种四膜虫 tRNA 的反密码子突变,UAA 和 UAG 终止密码子改变为谷氨酰胺密码子。
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Distinct paths to stop codon reassignment by the variant-code organisms Tetrahymena and Euplotes.变异编码生物四膜虫和游仆虫通过不同途径实现终止密码子重新分配。
Mol Cell Biol. 2006 Jan;26(2):438-47. doi: 10.1128/MCB.26.2.438-447.2006.
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Tetrahymena thermophila glutamine tRNA and its gene that corresponds to UAA termination codon.嗜热四膜虫谷氨酰胺tRNA及其对应UAA终止密码子的基因。
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A UGA termination suppression tRNATrp active in rabbit reticulocytes.一种在兔网织红细胞中具有活性的UGA终止抑制tRNATrp。
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引用本文的文献

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3
Either of the major H2A genes but not an evolutionarily conserved H2A.F/Z variant of Tetrahymena thermophila can function as the sole H2A gene in the yeast Saccharomyces cerevisiae.

本文引用的文献

1
An intron in a ribosomal protein gene from Tetrahymena.四膜虫核糖体蛋白基因中的内含子。
EMBO J. 1986 Oct;5(10):2711-7. doi: 10.1002/j.1460-2075.1986.tb04555.x.
2
Dramatic events in ciliate evolution: alteration of UAA and UAG termination codons to glutamine codons due to anticodon mutations in two Tetrahymena tRNAs.纤毛生物进化中的戏剧性事件:由于两种四膜虫 tRNA 的反密码子突变,UAA 和 UAG 终止密码子改变为谷氨酰胺密码子。
EMBO J. 1986 Jun;5(6):1307-11. doi: 10.1002/j.1460-2075.1986.tb04360.x.
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Preparation and partial characterization of cell-free protein-synthesizing extracts from Tetrahymena pyriformis.
嗜热四膜虫的两个主要H2A基因中的任何一个,但不是进化保守的H2A.F/Z变体,都可以在酿酒酵母中作为唯一的H2A基因发挥作用。
Mol Cell Biol. 1996 Jun;16(6):2878-87. doi: 10.1128/MCB.16.6.2878.
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Differential use of termination codons in ciliated protozoa.纤毛原生动物中终止密码子的差异使用。
Proc Natl Acad Sci U S A. 1989 May;86(9):3252-6. doi: 10.1073/pnas.86.9.3252.
梨形四膜虫无细胞蛋白质合成提取物的制备及部分特性分析
Biochem J. 1981 Mar 15;194(3):761-70. doi: 10.1042/bj1940761.
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Regulation of ribosome synthesis in Tetrahymena pyriformis. 3. Analysis by translation in vitro of RNA isolated during nutritional shift-down and nutritional shift-up.梨形四膜虫核糖体合成的调控。3. 营养下移和营养上移期间分离的RNA的体外翻译分析。
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Regulation of ribosome synthesis in Tetrahymena pyriformis. 2. Coordination of synthesis of ribosomal proteins and ribosomal RNA during nutritional shift-up.梨形四膜虫核糖体合成的调控。2. 营养转换期间核糖体蛋白与核糖体RNA合成的协调。
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Regulation of ribosome synthesis in Tetrahymena pyriformis. 1. Coordination of synthesis of ribosomal proteins and ribosomal RNA during nutritional shift-down.梨形四膜虫核糖体合成的调控。1. 营养物质向下转变期间核糖体蛋白与核糖体RNA合成的协调。
Eur J Biochem. 1984 May 2;140(3):469-75. doi: 10.1111/j.1432-1033.1984.tb08126.x.
7
Blocking of in vitro translation of Paramecium messenger RNAs is due to messenger RNA primary structure.草履虫信使核糖核酸体外翻译的阻断是由于信使核糖核酸的一级结构。
Biochimie. 1984 May;66(5):403-12. doi: 10.1016/0300-9084(84)90024-5.
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Codon--anticodon pairing: the wobble hypothesis.密码子-反密码子配对:摆动假说
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Amino acid activation in subcellular fractions of Tetrahymena pyriformis.梨形四膜虫亚细胞组分中的氨基酸活化作用。
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Cleavage of structural proteins during the assembly of the head of bacteriophage T4.在噬菌体T4头部组装过程中结构蛋白的切割
Nature. 1970 Aug 15;227(5259):680-5. doi: 10.1038/227680a0.