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鉴定参与冬枣果实品质调控的 MYB 转录因子。

Identification of MYB Transcription Factors Involving in Fruit Quality Regulation of Duch.

机构信息

College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.

出版信息

Genes (Basel). 2022 Dec 25;14(1):68. doi: 10.3390/genes14010068.

Abstract

The cultivated strawberry ( Duch.) is an important horticultural crop. The economic values of strawberry cultivars are decided by their fruit qualities including taste, color and aroma. The important role of MYB transcription factors in fruit quality regulation is recognized increasingly with the identification of genes involved in metabolism. A total of 407 genes of () were identified in the genome-wide scale and named according to subgenome locations. The 407 were clustered into 36 groups based on phylogenetic analysis. According to synteny analysis, whole genome duplication and segmental duplication contributed over 90% of the expansion of the family. A total of 101 loci with 1-6 alleles were identified by the homologous gene groups on homologous chromosomes. The differentially expressed profiles of three cultivars with different fruit quality and fruit ripe processes provided the 8 candidate loci involved in fruit quality regulation. In this experiment, 7, 5, and 4 were screeded as candidate genes involved in the regulation of metabolism/transportation of anthocyanins, sugars or organic acids and 4-hydroxy-2, 5-dimethyl-3(2H)-furanone, respectively. These results pointed out the key for further functional analysis of gene regulation of strawberry fruit quality and would be helpful in the clarification on ofe roles of in the metabolism of fruit crops.

摘要

培育的草莓(Duch.)是一种重要的园艺作物。草莓品种的经济价值取决于其果实品质,包括口感、颜色和香气。随着参与代谢的基因的鉴定,MYB 转录因子在果实品质调控中的重要作用越来越受到重视。在全基因组范围内共鉴定出 407 个()基因,并根据亚基因组位置进行了命名。根据系统发育分析,407 个基因被聚类为 36 个组。根据共线性分析,全基因组复制和片段复制导致该家族的扩张超过 90%。通过同源染色体上同源基因簇鉴定出 101 个具有 1-6 个等位基因的位点。三种不同果实品质和果实成熟过程的品种的差异表达谱提供了 8 个候选基因参与果实品质调控。在本实验中,7、5 和 4 个基因分别被筛选为参与调控花色苷、糖或有机酸代谢/运输以及 4-羟基-2,5-二甲基-3(2H)-呋喃酮的候选基因。这些结果指出了草莓果实品质基因调控的关键,为进一步进行基因功能分析提供了帮助,有助于阐明果实作物代谢中 MYB 转录因子的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/888f/9859318/049a6fc0d1be/genes-14-00068-g001.jpg

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