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CCY9414对无机磷酸盐限制的适应性——磷限制刺激子的鉴定 RNA测序

Acclimation of CCY9414 to inorganic phosphate limitation - Identification of the P-limitation stimulon RNA-seq.

作者信息

Santoro Mariano, Hassenrück Christiane, Labrenz Matthias, Hagemann Martin

机构信息

Department of Biological Oceanography, Leibniz Institute for Baltic Sea Research, Warnemünde (IOW), Rostock, Germany.

Department of Plant Physiology, Institute for Biosciences, University of Rostock, Rostock, Germany.

出版信息

Front Microbiol. 2023 Jan 4;13:1082763. doi: 10.3389/fmicb.2022.1082763. eCollection 2022.

Abstract

is a toxic, filamentous cyanobacterium capable of fixing atmospheric N, which is often dominating cyanobacterial bloom events in the Baltic Sea and other brackish water systems worldwide. Increasing phosphate limitation has been considered as one environmental factor promoting cyanobacterial mass developments. In the present study, we analyzed the response of strain CCY9414 toward strong phosphate limitation. Growth of the strain was diminished under P-deplete conditions; however, filaments contained more polyphosphate under P-deplete compared to P-replete conditions. Using RNA-seq, gene expression was compared in CCY9414 after 7 and 14 days in P-deplete and P-replete conditions, respectively. After 7 days, 112 genes were significantly up-regulated in P-deplete filaments, among them was a high proportion of genes encoding proteins related to P-homeostasis such as transport systems for different P species. Many of these genes became also up-regulated after 14 days compared to 7 days in filaments grown under P-replete conditions, which was consistent with the almost complete consumption of dissolved P in these cultures after 14 days. In addition to genes directly related to P starvation, genes encoding proteins for bioactive compound synthesis, gas vesicles formation, or sugar catabolism were stimulated under P-deplete conditions. Collectively, our data describe an experimentally validated P-stimulon in CCY9414 and provide the indication that severe P limitation could indeed support bloom formation by this filamentous strain.

摘要

是一种有毒的丝状蓝藻,能够固定大气中的氮,在波罗的海和全球其他半咸水系统中,它常常在蓝藻水华事件中占主导地位。越来越多的磷限制被认为是促进蓝藻大量繁殖的一个环境因素。在本研究中,我们分析了CCY9414菌株对强烈磷限制的反应。在缺磷条件下,该菌株的生长受到抑制;然而,与磷充足条件相比,缺磷条件下的丝状体含有更多的多聚磷酸盐。使用RNA测序,分别比较了CCY9414在缺磷和磷充足条件下7天和14天后的基因表达。7天后,缺磷丝状体中有112个基因显著上调,其中很大一部分是编码与磷稳态相关蛋白质的基因,如不同磷物种的转运系统。与在磷充足条件下生长的丝状体相比,在14天时,这些基因中的许多在14天也比7天时上调,这与这些培养物中溶解磷在14天后几乎完全消耗一致。除了与磷饥饿直接相关的基因外,编码生物活性化合物合成、气胞形成或糖分解代谢蛋白质的基因在缺磷条件下也受到刺激。总体而言,我们的数据描述了CCY9414中经过实验验证的磷刺激子,并表明严重的磷限制确实可能支持这种丝状菌株形成水华。

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