• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

比较转录组分析以揭示参与忍冬属大花忍冬突变体的关键乙烯基因。

Comparative transcriptome analysis to reveal key ethylene genes involved in a Lonicera macranthoides mutant.

作者信息

Long YuQing, Zeng Juan, Yang Min, Zhou XinRu, Zeng Mei, Liu ChangYu, Tong QiaoZhen, Zhou RiBao, Liu XiangDan

机构信息

College of Pharmacy, Hunan University of Chinese Medicine, Changsha, 410208, China.

Key Laboratory of Germplasm Resources and Standardized Planting of Hunan Large-Scale Genuine Medicinal Materials, Changsha, 410208, China.

出版信息

Genes Genomics. 2023 Apr;45(4):437-450. doi: 10.1007/s13258-022-01354-6. Epub 2023 Jan 25.

DOI:10.1007/s13258-022-01354-6
PMID:36694039
Abstract

BACKGROUND

Lonicera macranthoides Hand.-Mazz. is an important medicinal plant. Xianglei-type (XL) L. macranthoides was formed after many years of cultivation by researchers on the basis of the natural mutant. The corolla of L. macranthoides XL remains unexpanded and its flowering period is nearly three times longer than that of wild-type (WT) plants. However, the molecular mechanism behind this desirable trait remains a mystery.

OBJECTIVE

To understand the floral phenotype differences between L. macranthoides and L. macranthoides XL at the molecular level.

METHODS

Transcriptome analysis was performed on L. macranthoides XL and WT. One DEG was cloned by RT-PCR amplification and selected for qRT-PCR analysis.

RESULTS

Transcriptome analysis showed that there were 5603 differentially expressed genes (DEGs) in XL vs. WT. Enrichment analysis of DEGs showed that pathways related to plant hormone signal transduction were significantly enriched. We identified 23 key genes in ethylene biosynthesis and signal transduction pathways. The most abundant were the ethylene biosynthesis DEGs. In addition, the open reading frames (ORFs) of WT and XL ETR2 were successfully cloned and named LM-ETR2 (GenBank: MW334978) and LM-XL-ETR2 (GenBank: MW334978), respectively. qRT-PCR at different flowering stages suggesting that ETR2 acts in the whole stage of flower development of WT and XL.

CONCLUSIONS

This study provides new insight into the molecular mechanism that regulates the development of special traits in the flowers of L. macranthoides XL. The plant hormone ethylene plays an important role in flower development and flowering duration prolongation in L. macranthoides. The ethylene synthesis gene could be more responsible for the flower phenotype of XL. The genes identified here can be used for breeding and improvement of other flowering plants after functional verification.

摘要

背景

灰毡毛忍冬是一种重要的药用植物。湘蕾型灰毡毛忍冬是研究人员在自然突变体的基础上经过多年培育形成的。湘蕾型灰毡毛忍冬的花冠保持未展开状态,其花期比野生型植株长近三倍。然而,这一优良性状背后的分子机制仍是个谜。

目的

在分子水平上了解灰毡毛忍冬与湘蕾型灰毡毛忍冬之间的花表型差异。

方法

对湘蕾型灰毡毛忍冬和野生型灰毡毛忍冬进行转录组分析。通过RT-PCR扩增克隆一个差异表达基因(DEG)并进行qRT-PCR分析。

结果

转录组分析表明,湘蕾型与野生型相比有5603个差异表达基因。差异表达基因的富集分析表明,与植物激素信号转导相关的途径显著富集。我们在乙烯生物合成和信号转导途径中鉴定出23个关键基因。乙烯生物合成差异表达基因最为丰富。此外,成功克隆了野生型和湘蕾型ETR2的开放阅读框(ORF),分别命名为LM-ETR2(GenBank:MW334978)和LM-XL-ETR2(GenBank:MW334978)。不同开花阶段的qRT-PCR表明,ETR2在野生型和湘蕾型花发育的整个阶段都起作用。

结论

本研究为调控湘蕾型灰毡毛忍冬花特殊性状发育的分子机制提供了新的见解。植物激素乙烯在灰毡毛忍冬花发育和花期延长中起重要作用。乙烯合成基因可能对湘蕾型的花表型更有影响。这里鉴定出的基因经功能验证后可用于其他开花植物的育种和改良。

相似文献

1
Comparative transcriptome analysis to reveal key ethylene genes involved in a Lonicera macranthoides mutant.比较转录组分析以揭示参与忍冬属大花忍冬突变体的关键乙烯基因。
Genes Genomics. 2023 Apr;45(4):437-450. doi: 10.1007/s13258-022-01354-6. Epub 2023 Jan 25.
2
Cloning and expression of gene in two varieties.两种品种中 基因的克隆与表达。
J Genet. 2021;100.
3
Transcriptomic and metabolomic profiling reveals molecular regulatory network involved in flower development and phenotypic changes in two varieties.转录组学和代谢组学分析揭示了两个品种花卉发育和表型变化所涉及的分子调控网络。
3 Biotech. 2024 Jul;14(7):174. doi: 10.1007/s13205-024-04019-1. Epub 2024 Jun 5.
4
Transcriptomic and metabolomic analyses provide insights into the biosynthesis of chlorogenic acids in Lonicera macranthoides Hand.-Mazz.转录组学和代谢组学分析为研究大花忍冬中绿原酸的生物合成提供了线索。
PLoS One. 2021 May 26;16(5):e0251390. doi: 10.1371/journal.pone.0251390. eCollection 2021.
5
[Cloning and function analysis of chalcone isomerase gene and chalcone synthase gene in Lonicera macranthoides].[大花忍冬查尔酮异构酶基因与查尔酮合酶基因的克隆及功能分析]
Zhongguo Zhong Yao Za Zhi. 2022 May;47(9):2419-2429. doi: 10.19540/j.cnki.cjcmm.20220212.101.
6
Transcriptome Analysis Reveals the Mechanism Underlying the Production of a High Quantity of Chlorogenic Acid in Young Leaves of Lonicera macranthoides Hand.-Mazz.转录组分析揭示了忍冬幼叶中大量产生绿原酸的潜在机制。
PLoS One. 2015 Sep 18;10(9):e0137212. doi: 10.1371/journal.pone.0137212. eCollection 2015.
7
[Transcriptional regulation mechanism of differential accumulation of flavonoids in different varieties of Lonicera macranthoides based on metabonomics and transcriptomics].基于代谢组学和转录组学的不同品种大花忍冬中黄酮类化合物差异积累的转录调控机制
Zhongguo Zhong Yao Za Zhi. 2024 May;49(10):2666-2679. doi: 10.19540/j.cnki.cjcmm.20240211.101.
8
Comparative transcriptomics analysis revealing flower trichome development during flower development in two Lonicera japonica Thunb. cultivars using RNA-seq.基于 RNA-seq 的两种忍冬品种花发育过程中花被片表皮毛发育的比较转录组学分析。
BMC Plant Biol. 2020 Jul 17;20(1):341. doi: 10.1186/s12870-020-02546-6.
9
Transcriptomic and targeted metabolomic analyses provide insights into the flavonoids biosynthesis in the flowers of Lonicera macranthoides.转录组学和靶向代谢组学分析为大花忍冬花中类黄酮生物合成提供了新见解。
BMC Biotechnol. 2024 Apr 12;24(1):19. doi: 10.1186/s12896-024-00846-5.
10
Analysis of codon usage patterns in "Lonicerae Flos" (Lonicera macranthoides Hand. -Mazz.) based on transcriptome data.基于转录组数据的“金银花”(忍冬 Lonicera macranthoides Hand. -Mazz.)密码子使用模式分析。
Gene. 2019 Jul 15;705:127-132. doi: 10.1016/j.gene.2019.04.065. Epub 2019 Apr 24.

引用本文的文献

1
Accumulation differences of high-value ingredients in different phenotype insights from integrative metabolome and transcriptome analyses.不同表型中高价值成分的积累差异:综合代谢组学和转录组学分析的见解
Front Plant Sci. 2025 Mar 4;16:1533263. doi: 10.3389/fpls.2025.1533263. eCollection 2025.
2
Transcriptomic and metabolomic profiling reveals molecular regulatory network involved in flower development and phenotypic changes in two varieties.转录组学和代谢组学分析揭示了两个品种花卉发育和表型变化所涉及的分子调控网络。
3 Biotech. 2024 Jul;14(7):174. doi: 10.1007/s13205-024-04019-1. Epub 2024 Jun 5.

本文引用的文献

1
Research Progress and Future Development Trends in Medicinal Plant Transcriptomics.药用植物转录组学的研究进展与未来发展趋势
Front Plant Sci. 2021 Jul 28;12:691838. doi: 10.3389/fpls.2021.691838. eCollection 2021.
2
Transcriptome-wide characterization of the WRKY family genes in Lonicera macranthoides and the role of LmWRKY16 in plant senescence.忍冬WRKY家族基因的全转录组特征及LmWRKY16在植物衰老中的作用
Genes Genomics. 2022 Feb;44(2):219-235. doi: 10.1007/s13258-021-01118-8. Epub 2021 Jun 10.
3
Transcriptomic and metabolomic analyses provide insights into the biosynthesis of chlorogenic acids in Lonicera macranthoides Hand.-Mazz.
转录组学和代谢组学分析为研究大花忍冬中绿原酸的生物合成提供了线索。
PLoS One. 2021 May 26;16(5):e0251390. doi: 10.1371/journal.pone.0251390. eCollection 2021.
4
Dendrobium orchids carrying antisense ACC oxidase: small changes in flower morphology and a delay of bud abortion, flower senescence, and abscission of flowers.带有反义 ACC 氧化酶的石斛兰花:花朵形态的微小变化,以及花蕾败育、花朵衰老和脱落的延迟。
Transgenic Res. 2020 Aug;29(4):429-442. doi: 10.1007/s11248-020-00209-8. Epub 2020 Jul 20.
5
Advances in AP2/ERF super-family transcription factors in plant.植物中 AP2/ERF 超家族转录因子的研究进展。
Crit Rev Biotechnol. 2020 Sep;40(6):750-776. doi: 10.1080/07388551.2020.1768509. Epub 2020 Jun 10.
6
Different regulatory modules of two mango ERS1 promoters modulate specific gene expression in response to phytohormones in transgenic model plants.两个芒果 ERS1 启动子的不同调控模块调节转基因模式植物中对植物激素的特定基因表达。
Plant Sci. 2019 Dec;289:110269. doi: 10.1016/j.plantsci.2019.110269. Epub 2019 Sep 13.
7
1-Aminocyclopropane-1-Carboxylic Acid Oxidase (ACO): The Enzyme That Makes the Plant Hormone Ethylene.1-氨基环丙烷-1-羧酸氧化酶(ACO):合成植物激素乙烯的酶
Front Plant Sci. 2019 May 29;10:695. doi: 10.3389/fpls.2019.00695. eCollection 2019.
8
Analysis of codon usage patterns in "Lonicerae Flos" (Lonicera macranthoides Hand. -Mazz.) based on transcriptome data.基于转录组数据的“金银花”(忍冬 Lonicera macranthoides Hand. -Mazz.)密码子使用模式分析。
Gene. 2019 Jul 15;705:127-132. doi: 10.1016/j.gene.2019.04.065. Epub 2019 Apr 24.
9
Dietary supplementation of leaf powder improves amino acid profiles in serum and longissimus thoracis muscle of growing-finishing pigs.日粮中添加叶粉可改善生长育肥猪血清和胸最长肌中的氨基酸谱。
Anim Nutr. 2016 Dec;2(4):271-275. doi: 10.1016/j.aninu.2016.08.006. Epub 2016 Aug 21.
10
Transcriptome Analysis Reveals Molecular Signatures of Luteoloside Accumulation in Senescing Leaves of Lonicera macranthoides.转录组分析揭示了毛花柱忍冬衰老叶片中叶苷积累的分子特征。
Int J Mol Sci. 2018 Mar 28;19(4):1012. doi: 10.3390/ijms19041012.