Veverka Pavel, Brom Tomáš, Janovič Tomáš, Stojaspal Martin, Pinkas Matyáš, Nováček Jiří, Hofr Ctirad
LifeB, FGP - NCBR, Faculty of Science, Masaryk University, Kamenice 753/5, Brno 625 00, Czech Republic.
Institute of Biophysics of the Czech Academy of Sciences, Scientific Incubator, Královopolská 135, Brno 612 65, Czech Republic.
Comput Struct Biotechnol J. 2022 Dec 19;21:731-741. doi: 10.1016/j.csbj.2022.12.026. eCollection 2023.
The RE1-Silencing Transcription factor (REST) is essential for neuronal differentiation. Here, we report the first 18.5-angstrom electron microscopy structure of human REST. The refined electron map suggests that REST forms a torus that can accommodate DNA double-helix in the central hole. Additionally, we quantitatively described REST binding to the canonical DNA sequence of the neuron-restrictive silencer element. We developed protocols for the expression and purification of full-length REST and the shortened variant REST-N62 produced by alternative splicing. We tested the mutual interaction of full-length REST and the splicing variant REST-N62. Revealed structure-function relationships of master neuronal repressor REST will allow finding new biological ways of prevention and treatment of neurodegenerative disorders and diseases.
RE1沉默转录因子(REST)对神经元分化至关重要。在此,我们报告了人类REST的首个18.5埃电子显微镜结构。优化后的电子密度图表明,REST形成了一个环面,其中心孔可容纳DNA双螺旋。此外,我们定量描述了REST与神经元限制性沉默元件的典型DNA序列的结合。我们开发了全长REST以及由可变剪接产生的缩短变体REST-N62的表达和纯化方案。我们测试了全长REST与剪接变体REST-N62之间的相互作用。揭示主神经元抑制因子REST的结构-功能关系将有助于找到预防和治疗神经退行性疾病的新生物学方法。