• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人类转录因子。

The Human Transcription Factors.

机构信息

Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada.

Donnelly Centre, University of Toronto, Toronto, ON, Canada.

出版信息

Cell. 2018 Feb 8;172(4):650-665. doi: 10.1016/j.cell.2018.01.029.

DOI:10.1016/j.cell.2018.01.029
PMID:29425488
Abstract

Transcription factors (TFs) recognize specific DNA sequences to control chromatin and transcription, forming a complex system that guides expression of the genome. Despite keen interest in understanding how TFs control gene expression, it remains challenging to determine how the precise genomic binding sites of TFs are specified and how TF binding ultimately relates to regulation of transcription. This review considers how TFs are identified and functionally characterized, principally through the lens of a catalog of over 1,600 likely human TFs and binding motifs for two-thirds of them. Major classes of human TFs differ markedly in their evolutionary trajectories and expression patterns, underscoring distinct functions. TFs likewise underlie many different aspects of human physiology, disease, and variation, highlighting the importance of continued effort to understand TF-mediated gene regulation.

摘要

转录因子(TFs)识别特定的 DNA 序列以控制染色质和转录,形成一个复杂的系统,指导基因组的表达。尽管人们对理解 TFs 如何控制基因表达非常感兴趣,但确定 TFs 的精确基因组结合位点是如何指定的以及 TF 结合如何最终与转录调控相关仍然具有挑战性。本综述考虑了如何通过超过 1600 种可能的人类 TFs 的目录以及其中三分之二的结合基序的视角来鉴定和功能表征 TFs。人类 TFs 的主要类别在进化轨迹和表达模式上有明显差异,突出了其不同的功能。TFs 同样也是人类生理学、疾病和变异的许多不同方面的基础,突出了继续努力理解 TF 介导的基因调控的重要性。

相似文献

1
The Human Transcription Factors.人类转录因子。
Cell. 2018 Feb 8;172(4):650-665. doi: 10.1016/j.cell.2018.01.029.
2
Positional specificity of different transcription factor classes within enhancers.增强子中不同转录因子类别的位置特异性。
Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):E7222-E7230. doi: 10.1073/pnas.1804663115. Epub 2018 Jul 9.
3
Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibility.基于染色质可及性评估预测转录因子结合位点的模型可转移性。
BMC Bioinformatics. 2017 Jul 27;18(1):355. doi: 10.1186/s12859-017-1769-7.
4
DNA-dependent formation of transcription factor pairs alters their binding specificity.DNA 依赖性转录因子对的形成改变了它们的结合特异性。
Nature. 2015 Nov 19;527(7578):384-8. doi: 10.1038/nature15518. Epub 2015 Nov 9.
5
Modelling the evolution of transcription factor binding preferences in complex eukaryotes.在复杂真核生物中模拟转录因子结合偏好的进化。
Sci Rep. 2017 Aug 8;7(1):7596. doi: 10.1038/s41598-017-07761-0.
6
Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data.从DNA结合结构域、染色质可及性和基因表达数据预测转录因子结合基序。
Nucleic Acids Res. 2017 Jun 2;45(10):5666-5677. doi: 10.1093/nar/gkx358.
7
Sequence features of DNA binding sites reveal structural class of associated transcription factor.DNA结合位点的序列特征揭示了相关转录因子的结构类别。
Bioinformatics. 2006 Jan 15;22(2):157-63. doi: 10.1093/bioinformatics/bti731. Epub 2005 Nov 2.
8
Molecular and structural considerations of TF-DNA binding for the generation of biologically meaningful and accurate phylogenetic footprinting analysis: the LysR-type transcriptional regulator family as a study model.用于生成具有生物学意义和准确的系统发育足迹分析的TF-DNA结合的分子和结构考量:以LysR型转录调节因子家族作为研究模型
BMC Genomics. 2016 Aug 27;17(1):686. doi: 10.1186/s12864-016-3025-3.
9
CrusTF: a comprehensive resource of transcriptomes for evolutionary and functional studies of crustacean transcription factors.甲壳动物转录因子进化和功能研究的转录组综合资源——CrusTF
BMC Genomics. 2017 Nov 25;18(1):908. doi: 10.1186/s12864-017-4305-2.
10
Alu elements contain many binding sites for transcription factors and may play a role in regulation of developmental processes.Alu元件含有许多转录因子结合位点,可能在发育过程的调控中发挥作用。
BMC Genomics. 2006 Jun 1;7:133. doi: 10.1186/1471-2164-7-133.

引用本文的文献

1
Global analysis of transcription factors using both the reference genome and the multi-transcriptome of reveals a sophisticated functional strategy.利用参考基因组和[具体对象]的多转录组对转录因子进行全局分析,揭示了一种复杂的功能策略。 (注:原文中“the multi-transcriptome of ”表述不完整,缺少具体内容)
Front Plant Sci. 2025 Aug 28;16:1529326. doi: 10.3389/fpls.2025.1529326. eCollection 2025.
2
Genome-Wide Identification of the YABBY Gene Family in Maize and Its Expression Analysis Under Low Phosphorus and High Nitrogen Stress.玉米YABBY基因家族的全基因组鉴定及其在低磷和高氮胁迫下的表达分析
Plants (Basel). 2025 Sep 4;14(17):2763. doi: 10.3390/plants14172763.
3
The role of the transcription factor PATZ1 in tumorigenesis and metabolic regulation.
转录因子PATZ1在肿瘤发生和代谢调节中的作用。
J Cancer Res Clin Oncol. 2025 Sep 11;151(9):254. doi: 10.1007/s00432-025-06305-8.
4
Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity.人巨细胞病毒感染利用染色质组织来降低TEAD1转录因子活性。
Elife. 2025 Sep 10;13:RP101578. doi: 10.7554/eLife.101578.
5
A framework to mine laser microdissection-based omics data and uncover regulators of pancreatic cancer heterogeneity.一种挖掘基于激光显微切割的组学数据并揭示胰腺癌异质性调节因子的框架。
Gigascience. 2025 Jan 6;14. doi: 10.1093/gigascience/giaf101.
6
A General Principle of Neuronal Evolution Reveals a Human-Accelerated Neuron Type Potentially Underlying the High Prevalence of Autism in Humans.神经元进化的一般原则揭示了一种可能是人类自闭症高发潜在原因的人类加速神经元类型。
Mol Biol Evol. 2025 Sep 1;42(9). doi: 10.1093/molbev/msaf189.
7
Loss of multiple micro-RNAs uncovers multi-level restructuring of gene regulation in rodents.多种微小RNA的缺失揭示了啮齿动物基因调控的多层次重组。
BMC Genomics. 2025 Sep 2;26(1):800. doi: 10.1186/s12864-025-11815-3.
8
Molecular Mechanisms of Gain-of-Function Mutations in λ Cro Revealed by Molecular Dynamics Simulations.通过分子动力学模拟揭示的λ Cro功能获得性突变的分子机制
bioRxiv. 2025 Aug 19:2025.08.14.670369. doi: 10.1101/2025.08.14.670369.
9
SPANXB1 drives brain metastasis in breast cancer via MMP1 regulation: potential therapeutic insights with metformin.SPANXB1通过基质金属蛋白酶1调控驱动乳腺癌脑转移:二甲双胍的潜在治疗启示
Cell Death Discov. 2025 Aug 30;11(1):418. doi: 10.1038/s41420-025-02721-4.
10
SP1-Mediated upregulation of CLEC18B promotes the proliferation and metastasis of glioma through regulation of the Wnt/β-Catenin/EMT Pathway.SP1介导的CLEC18B上调通过调控Wnt/β-连环蛋白/上皮-间质转化途径促进胶质瘤的增殖和转移。
Transl Oncol. 2025 Aug 28;61:102515. doi: 10.1016/j.tranon.2025.102515.