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松巴翁戈尔牛基因的遗传多态性及其与生长性状的关联。

Genetic polymorphism of gene in Sumba Ongole () cattle and its association with growth traits.

作者信息

Gaina Cynthia Dewi, Amalo Filphin Adolfin

机构信息

Laboratory of Veterinary Clinic, Reproduction, Pathology, and Nutrition, Faculty of Medicine and Veterinary Medicine, Universitas Nusa Cendana, Kupang, Indonesia.

Laboratory of Veterinary Anatomy, Physiology, Pharmacology and Biochemistry, Faculty of Medicine and Veterinary Medicine, Universitas Nusa Cendana, Kupang, Indonesia.

出版信息

J Adv Vet Anim Res. 2022 Nov 18;9(4):565-572. doi: 10.5455/javar.2022.i625. eCollection 2022 Dec.

Abstract

OBJECTIVE

As one of the most valuable genetic resources of Ongole beef cattle globally, the Sumba Ongole (SO) cattle population is being studied in this investigation of myostatin () gene polymorphism and its association with growth traits.

MATERIALS AND METHODS

Blood samples from 161 SO cattle were collected and analyzed. Deoxyribonucleic acid (DNA) was isolated. The DNA was electrophoresed and extracted, and finally, the annealing temperature was optimized, followed by amplification and sequencing. Next, we used a Basic local alignment search tool to assess the sequencing data.

RESULTS

The analysis revealed 22 single nucleotide polymorphisms (SNPs) in the gene in this region that showed genetic variation. Two SNPs, c.424 G > A, and c.467 G > C, were found to be significantly associated with SO cattle phenotypes of wither height, heart girth, and hip height ( < 0.05) but not with body weight or body length ( > 0.05).

CONCLUSION

As a result of our findings, the gene polymorphism and its correlation with growth traits in SO cattle may be employed as a candidate marker in SO cattle and other beef cattle breeds.

摘要

目的

作为全球最具价值的翁戈勒肉牛遗传资源之一,本次研究对松巴翁戈勒(SO)牛群的肌肉生长抑制素()基因多态性及其与生长性状的关联进行了研究。

材料与方法

采集并分析了161头SO牛的血样。提取脱氧核糖核酸(DNA)。对DNA进行电泳、提取,最后优化退火温度,随后进行扩增和测序。接下来,我们使用基本局部比对搜索工具评估测序数据。

结果

分析显示该区域的基因中有22个单核苷酸多态性(SNP)表现出遗传变异。发现两个SNP,即c.424 G>A和c.467 G>C,与SO牛的肩高、胸围和臀高表型显著相关(<0.05),但与体重或体长无关(>0.05)。

结论

根据我们的研究结果,SO牛的基因多态性及其与生长性状的相关性可作为SO牛和其他肉牛品种的候选标记。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/896a/9868797/df307d163da6/JAVAR-9-565-g001.jpg

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