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二甲双胍使用史与全基因组 DNA 甲基化谱:衰老和长寿的潜在分子机制。

Metformin use history and genome-wide DNA methylation profile: potential molecular mechanism for aging and longevity.

机构信息

Department of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Palo Alto, CA 94304, USA.

Department of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA.

出版信息

Aging (Albany NY). 2023 Feb 2;15(3):601-616. doi: 10.18632/aging.204498.

Abstract

BACKGROUND

Metformin, a commonly prescribed anti-diabetic medication, has repeatedly been shown to hinder aging in pre-clinical models and to be associated with lower mortality for humans. It is, however, not well understood how metformin can potentially prolong lifespan from a biological standpoint. We hypothesized that metformin's potential mechanism of action for longevity is through its epigenetic modifications.

METHODS

To test our hypothesis, we conducted a post-hoc analysis of available genome-wide DNA methylation (DNAm) data obtained from whole blood collected from inpatients with and without a history of metformin use. We assessed the methylation profile of 171 patients (first run) and only among 63 diabetic patients (second run) and compared the DNAm rates between metformin users and nonusers.

RESULTS

Enrichment analysis from the Kyoto Encyclopedia of Genes and Genome (KEGG) showed pathways relevant to metformin's mechanism of action, such as longevity, AMPK, and inflammatory pathways. We also identified several pathways related to delirium whose risk factor is aging. Moreover, top hits from the Gene Ontology (GO) included HIF-1α pathways. However, no individual CpG site showed genome-wide statistical significance ( < 5E-08).

CONCLUSION

This study may elucidate metformin's potential role in longevity through epigenetic modifications and other possible mechanisms of action.

摘要

背景

二甲双胍是一种常用的抗糖尿病药物,已在临床前模型中反复证明能延缓衰老,并与人类死亡率降低相关。然而,从生物学角度来看,二甲双胍如何能潜在地延长寿命还不太清楚。我们假设二甲双胍延长寿命的潜在作用机制是通过其表观遗传修饰。

方法

为了验证我们的假设,我们对来自使用和未使用二甲双胍的住院患者全血的可用全基因组 DNA 甲基化(DNAm)数据进行了事后分析。我们评估了 171 名患者的甲基化谱(第一轮),仅在 63 名糖尿病患者中(第二轮)进行了评估,并比较了二甲双胍使用者和非使用者之间的 DNAm 率。

结果

京都基因与基因组百科全书(KEGG)的富集分析显示了与二甲双胍作用机制相关的途径,如长寿、AMPK 和炎症途径。我们还确定了几个与谵妄相关的途径,其危险因素是衰老。此外,基因本体论(GO)的主要命中结果包括 HIF-1α 途径。然而,没有单个 CpG 位点表现出全基因组统计学意义(<5E-08)。

结论

这项研究可能通过表观遗传修饰和其他可能的作用机制阐明二甲双胍在长寿中的潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/562c/9970305/097512935b67/aging-15-204498-g001.jpg

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